Protein–RNA interactions for Protein: Q969J2

ZKSCAN4, Zinc finger protein with KRAB and SCAN domains 4, humanhuman

Predicted RBP Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4Q969J2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN4Q969J2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN4Q969J2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.28■■■□□ 2.6
ZKSCAN4Q969J2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 DUX4L13-201ENST00000554103 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L15-201ENST00000611059 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L23-201ENST00000615195 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L24-201ENST00000617576 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L22-201ENST00000618238 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L20-201ENST00000619712 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L21-201ENST00000622058 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L10-201ENST00000622460 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L25-201ENST00000624915 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 AC120057.4-201ENST00000624722 1615 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.25■■■□□ 2.59
ZKSCAN4Q969J2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZKSCAN4Q969J2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ZKSCAN4Q969J2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.22■■■□□ 2.59
ZKSCAN4Q969J2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.22■■■□□ 2.59
ZKSCAN4Q969J2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
ZKSCAN4Q969J2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.21■■■□□ 2.59
ZKSCAN4Q969J2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
ZKSCAN4Q969J2 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.19■■■□□ 2.58
ZKSCAN4Q969J2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZKSCAN4Q969J2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.15■■■□□ 2.58
ZKSCAN4Q969J2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZKSCAN4Q969J2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.14■■■□□ 2.58
ZKSCAN4Q969J2 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.14■■■□□ 2.58
ZKSCAN4Q969J2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
ZKSCAN4Q969J2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZKSCAN4Q969J2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZKSCAN4Q969J2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZKSCAN4Q969J2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
ZKSCAN4Q969J2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.09■■■□□ 2.57
ZKSCAN4Q969J2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
ZKSCAN4Q969J2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.07■■■□□ 2.56
ZKSCAN4Q969J2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZKSCAN4Q969J2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ZKSCAN4Q969J2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ZKSCAN4Q969J2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ZKSCAN4Q969J2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ZKSCAN4Q969J2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 AL161658.1-201ENST00000623641 1967 ntBASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZKSCAN4Q969J2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.96■■■□□ 2.55
ZKSCAN4Q969J2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ZKSCAN4Q969J2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.93■■■□□ 2.54
ZKSCAN4Q969J2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.93■■■□□ 2.54
ZKSCAN4Q969J2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms