Protein–RNA interactions for Protein: Q969J2

ZKSCAN4, Zinc finger protein with KRAB and SCAN domains 4, humanhuman

Predicted RBP Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4Q969J2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN4Q969J2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN4Q969J2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN4Q969J2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.28■■■□□ 2.6
ZKSCAN4Q969J2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.27■■■□□ 2.6
ZKSCAN4Q969J2 DUX4L13-201ENST00000554103 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L15-201ENST00000611059 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L23-201ENST00000615195 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L24-201ENST00000617576 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L22-201ENST00000618238 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L20-201ENST00000619712 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L21-201ENST00000622058 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L10-201ENST00000622460 1267 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 DUX4L25-201ENST00000624915 1269 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 AC120057.4-201ENST00000624722 1615 ntBASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZKSCAN4Q969J2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.25■■■□□ 2.59
ZKSCAN4Q969J2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZKSCAN4Q969J2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN4Q969J2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ZKSCAN4Q969J2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.22■■■□□ 2.59
ZKSCAN4Q969J2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.22■■■□□ 2.59
ZKSCAN4Q969J2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
ZKSCAN4Q969J2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.21■■■□□ 2.59
ZKSCAN4Q969J2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
ZKSCAN4Q969J2 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.19■■■□□ 2.58
ZKSCAN4Q969J2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZKSCAN4Q969J2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.17■■■□□ 2.58
ZKSCAN4Q969J2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.15■■■□□ 2.58
ZKSCAN4Q969J2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZKSCAN4Q969J2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.14■■■□□ 2.58
ZKSCAN4Q969J2 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.14■■■□□ 2.58
ZKSCAN4Q969J2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
ZKSCAN4Q969J2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZKSCAN4Q969J2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZKSCAN4Q969J2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZKSCAN4Q969J2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
ZKSCAN4Q969J2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.09■■■□□ 2.57
ZKSCAN4Q969J2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ZKSCAN4Q969J2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
ZKSCAN4Q969J2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.07■■■□□ 2.56
ZKSCAN4Q969J2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZKSCAN4Q969J2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ZKSCAN4Q969J2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ZKSCAN4Q969J2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ZKSCAN4Q969J2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.02■■■□□ 2.56
ZKSCAN4Q969J2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ZKSCAN4Q969J2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
ZKSCAN4Q969J2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ZKSCAN4Q969J2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 AL161658.1-201ENST00000623641 1967 ntBASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.98■■■□□ 2.55
ZKSCAN4Q969J2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZKSCAN4Q969J2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.96■■■□□ 2.55
ZKSCAN4Q969J2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ZKSCAN4Q969J2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZKSCAN4Q969J2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ZKSCAN4Q969J2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.93■■■□□ 2.54
ZKSCAN4Q969J2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.93■■■□□ 2.54
ZKSCAN4Q969J2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms