Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 URA8YJR103W 1737 nt9.55□□□□□ -0.88
UBP3Q01477 DAK2YFL053W 1776 nt9.55□□□□□ -0.88
UBP3Q01477 ASP3-1YLR155C 1089 nt9.54□□□□□ -0.88
UBP3Q01477 ASP3-2YLR157C 1089 nt9.54□□□□□ -0.88
UBP3Q01477 ASP3-3YLR158C 1089 nt9.54□□□□□ -0.88
UBP3Q01477 ASP3-4YLR160C 1089 nt9.54□□□□□ -0.88
UBP3Q01477 IMO32YGR031W 1029 nt9.53□□□□□ -0.88
UBP3Q01477 AIM1YAL046C 357 nt9.53□□□□□ -0.88
UBP3Q01477 YPR126CYPR126C 309 nt9.53□□□□□ -0.88
UBP3Q01477 ERG13YML126C 1476 nt9.52□□□□□ -0.89
UBP3Q01477 COQ8YGL119W 1506 nt9.51□□□□□ -0.89 RIP-Chip
UBP3Q01477 YFR036W-AYFR036W-A 651 nt9.5□□□□□ -0.89
UBP3Q01477 CPD1YGR247W 720 nt9.5□□□□□ -0.89
UBP3Q01477 ADH7YCR105W 1086 nt9.49□□□□□ -0.89
UBP3Q01477 QDR2YIL121W 1629 nt9.49□□□□□ -0.89
UBP3Q01477 THI72YOR192C 1800 nt9.48□□□□□ -0.89
UBP3Q01477 PAU15YIR041W 375 nt9.48□□□□□ -0.89
UBP3Q01477 KES1YPL145C 1305 nt9.48□□□□□ -0.89
UBP3Q01477 CTI6YPL181W 1521 nt9.47□□□□□ -0.89
UBP3Q01477 RRT8YOL048C 1029 nt9.47□□□□□ -0.89
UBP3Q01477 DIG1YPL049C 1359 nt9.46□□□□□ -0.9 RIP-Chip
UBP3Q01477 SAC7YDR389W 1965 nt9.46□□□□□ -0.9
UBP3Q01477 SGA1YIL099W 1650 nt9.45□□□□□ -0.9
UBP3Q01477 ILV2YMR108W 2064 nt9.45□□□□□ -0.9 RIP-Chip
UBP3Q01477 ZAP1YJL056C 2643 nt9.43□□□□□ -0.9 RIP-Chip
UBP3Q01477 IML3YBR107C 738 nt9.43□□□□□ -0.9
UBP3Q01477 GID8YMR135C 1368 nt9.42□□□□□ -0.9 RIP-Chip
UBP3Q01477 RFC1YOR217W 2586 nt9.41□□□□□ -0.9
UBP3Q01477 COG1YGL223C 1254 nt9.41□□□□□ -0.9
UBP3Q01477 UGP1YKL035W 1500 nt9.41□□□□□ -0.9
UBP3Q01477 ENT4YLL038C 744 nt9.4□□□□□ -0.9
UBP3Q01477 YLR046CYLR046C 813 nt9.4□□□□□ -0.9
UBP3Q01477 MHF1YOL086W-A 273 nt9.4□□□□□ -0.9
UBP3Q01477 YHR219WYHR219W 1875 nt9.4□□□□□ -0.91
UBP3Q01477 ADE8YDR408C 645 nt9.39□□□□□ -0.91
UBP3Q01477 SPS100YHR139C 981 nt9.39□□□□□ -0.91
UBP3Q01477 OPI3YJR073C 621 nt9.39□□□□□ -0.91
UBP3Q01477 ITR2YOL103W 1830 nt9.39□□□□□ -0.91
UBP3Q01477 MRS6YOR370C 1812 nt9.39□□□□□ -0.91
UBP3Q01477 GTB1YDR221W 2109 nt9.38□□□□□ -0.91
UBP3Q01477 TAF13YML098W 504 nt9.38□□□□□ -0.91
UBP3Q01477 YMR262WYMR262W 942 nt9.38□□□□□ -0.91
UBP3Q01477 REG2YBR050C 1017 nt9.38□□□□□ -0.91
UBP3Q01477 DLD3YEL071W 1491 nt9.37□□□□□ -0.91
UBP3Q01477 YJR114WYJR114W 393 nt9.37□□□□□ -0.91
UBP3Q01477 CBK1YNL161W 2271 nt9.35□□□□□ -0.91
UBP3Q01477 TVP23YDR084C 600 nt9.35□□□□□ -0.91
UBP3Q01477 POT1YIL160C 1254 nt9.35□□□□□ -0.91
UBP3Q01477 MLS1YNL117W 1665 nt9.35□□□□□ -0.91
UBP3Q01477 YKL133CYKL133C 1392 nt9.35□□□□□ -0.91
UBP3Q01477 GAL2YLR081W 1725 nt9.34□□□□□ -0.92
UBP3Q01477 PAU5YFL020C 369 nt9.33□□□□□ -0.92
UBP3Q01477 NIF3YGL221C 867 nt9.33□□□□□ -0.92
UBP3Q01477 APS2YJR058C 444 nt9.33□□□□□ -0.92
UBP3Q01477 LSR1LSR1 1175 nt9.33□□□□□ -0.92
UBP3Q01477 PGC1YPL206C 966 nt9.33□□□□□ -0.92
UBP3Q01477 HIS2YFR025C 1008 nt9.32□□□□□ -0.92
UBP3Q01477 ESS1YJR017C 513 nt9.31□□□□□ -0.92
UBP3Q01477 ELO1YJL196C 933 nt9.3□□□□□ -0.92
UBP3Q01477 AAC3YBR085W 924 nt9.3□□□□□ -0.92 RIP-Chip
UBP3Q01477 tS(GCU)LtS(GCU)L 80 nt9.29□□□□□ -0.92
UBP3Q01477 FAF1YIL019W 1041 nt9.29□□□□□ -0.92 RIP-Chip
UBP3Q01477 TUB4YLR212C 1422 nt9.28□□□□□ -0.92
UBP3Q01477 ABZ2YMR289W 1125 nt9.27□□□□□ -0.93
UBP3Q01477 YNR064CYNR064C 873 nt9.27□□□□□ -0.93
UBP3Q01477 YEL009C-AYEL009C-A 408 nt9.26□□□□□ -0.93
UBP3Q01477 SFL1YOR140W 2301 nt9.26□□□□□ -0.93
UBP3Q01477 SSL2YIL143C 2532 nt9.25□□□□□ -0.93
UBP3Q01477 STP3YLR375W 1032 nt9.24□□□□□ -0.93
UBP3Q01477 GSF2YML048W 1212 nt9.24□□□□□ -0.93
UBP3Q01477 YBR232CYBR232C 360 nt9.24□□□□□ -0.93
UBP3Q01477 YHL008CYHL008C 1884 nt9.23□□□□□ -0.93
UBP3Q01477 SUV3YPL029W 2214 nt9.23□□□□□ -0.93 RIP-Chip
UBP3Q01477 MGM101YJR144W 810 nt9.23□□□□□ -0.93
UBP3Q01477 PAM17YKR065C 594 nt9.23□□□□□ -0.93
UBP3Q01477 YMR209CYMR209C 1374 nt9.23□□□□□ -0.93
UBP3Q01477 FTH1YBR207W 1398 nt9.23□□□□□ -0.93
UBP3Q01477 HXK1YFR053C 1458 nt9.21□□□□□ -0.93 RIP-Chip
UBP3Q01477 NAS2YIL007C 663 nt9.21□□□□□ -0.94
UBP3Q01477 CDD1YLR245C 429 nt9.21□□□□□ -0.94
UBP3Q01477 ODC1YPL134C 933 nt9.21□□□□□ -0.94 RIP-Chip
UBP3Q01477 VMA11YPL234C 495 nt9.21□□□□□ -0.94
UBP3Q01477 KEL3YPL263C 1956 nt9.21□□□□□ -0.94
UBP3Q01477 SWT21YNL187W 1074 nt9.2□□□□□ -0.94
UBP3Q01477 TIP1YBR067C 633 nt9.2□□□□□ -0.94 RIP-Chip
UBP3Q01477 RPD3YNL330C 1302 nt9.2□□□□□ -0.94
UBP3Q01477 TPC1YGR096W 945 nt9.19□□□□□ -0.94 RIP-Chip
UBP3Q01477 YTH1YPR107C 627 nt9.19□□□□□ -0.94
UBP3Q01477 YMR265CYMR265C 1386 nt9.18□□□□□ -0.94
UBP3Q01477 AMF1YOR378W 1548 nt9.18□□□□□ -0.94
UBP3Q01477 MET1YKR069W 1782 nt9.17□□□□□ -0.94 RIP-Chip
UBP3Q01477 ENO2YHR174W 1314 nt9.17□□□□□ -0.94
UBP3Q01477 PCP1YGR101W 1041 nt9.17□□□□□ -0.94
UBP3Q01477 SNX3YOR357C 489 nt9.17□□□□□ -0.94
UBP3Q01477 CWP2YKL096W-A 279 nt9.16□□□□□ -0.94
UBP3Q01477 ALD5YER073W 1563 nt9.16□□□□□ -0.94
UBP3Q01477 TOK1YJL093C 2076 nt9.16□□□□□ -0.94
UBP3Q01477 YKL053WYKL053W 375 nt9.15□□□□□ -0.94
UBP3Q01477 CRC1YOR100C 984 nt9.15□□□□□ -0.94
UBP3Q01477 HAP5YOR358W 729 nt9.15□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms