Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 TUB4YLR212C 1422 nt8.16□□□□□ -1.1
VPS52P39904 TAT2YOL020W 1779 nt8.15□□□□□ -1.1
VPS52P39904 YMR209CYMR209C 1374 nt8.15□□□□□ -1.1
VPS52P39904 URA8YJR103W 1737 nt8.15□□□□□ -1.11
VPS52P39904 ASP3-1YLR155C 1089 nt8.14□□□□□ -1.11
VPS52P39904 ASP3-2YLR157C 1089 nt8.14□□□□□ -1.11
VPS52P39904 ASP3-3YLR158C 1089 nt8.14□□□□□ -1.11
VPS52P39904 ASP3-4YLR160C 1089 nt8.14□□□□□ -1.11
VPS52P39904 ARO8YGL202W 1503 nt8.13□□□□□ -1.11
VPS52P39904 YJL064WYJL064W 396 nt8.13□□□□□ -1.11
VPS52P39904 RRT8YOL048C 1029 nt8.13□□□□□ -1.11
VPS52P39904 PUP1YOR157C 786 nt8.13□□□□□ -1.11
VPS52P39904 UGP1YKL035W 1500 nt8.13□□□□□ -1.11
VPS52P39904 SPS100YHR139C 981 nt8.11□□□□□ -1.11
VPS52P39904 KES1YPL145C 1305 nt8.1□□□□□ -1.11
VPS52P39904 PAU19YMR325W 375 nt8.1□□□□□ -1.11
VPS52P39904 BET2YPR176C 978 nt8.1□□□□□ -1.11
VPS52P39904 RFC1YOR217W 2586 nt8.09□□□□□ -1.11
VPS52P39904 YDR455CYDR455C 309 nt8.09□□□□□ -1.11
VPS52P39904 SGA1YIL099W 1650 nt8.08□□□□□ -1.12
VPS52P39904 ILV2YMR108W 2064 nt8.07□□□□□ -1.12
VPS52P39904 DTR1YBR180W 1719 nt8.07□□□□□ -1.12
VPS52P39904 NIF3YGL221C 867 nt8.07□□□□□ -1.12
VPS52P39904 ADE8YDR408C 645 nt8.06□□□□□ -1.12
VPS52P39904 APS2YJR058C 444 nt8.06□□□□□ -1.12
VPS52P39904 ERG13YML126C 1476 nt8.06□□□□□ -1.12
VPS52P39904 QDR2YIL121W 1629 nt8.05□□□□□ -1.12
VPS52P39904 ENT4YLL038C 744 nt8.05□□□□□ -1.12
VPS52P39904 ZAP1YJL056C 2643 nt8.05□□□□□ -1.12
VPS52P39904 TVP23YDR084C 600 nt8.04□□□□□ -1.12
VPS52P39904 YFR036W-AYFR036W-A 651 nt8.04□□□□□ -1.12
VPS52P39904 CYT1YOR065W 930 nt8.04□□□□□ -1.12
VPS52P39904 PSD1YNL169C 1503 nt8.03□□□□□ -1.12
VPS52P39904 YJR114WYJR114W 393 nt8.03□□□□□ -1.12
VPS52P39904 AIM1YAL046C 357 nt8.03□□□□□ -1.12
VPS52P39904 DIG1YPL049C 1359 nt8.02□□□□□ -1.13
VPS52P39904 TIM44YIL022W 1296 nt8.02□□□□□ -1.13
VPS52P39904 ABZ2YMR289W 1125 nt8.02□□□□□ -1.13
VPS52P39904 IGD1YFR017C 588 nt8□□□□□ -1.13
VPS52P39904 YRF1-2YER190W 5046 nt8□□□□□ -1.13
VPS52P39904 NME1NME1 340 nt7.99□□□□□ -1.13
VPS52P39904 GID8YMR135C 1368 nt7.98□□□□□ -1.13
VPS52P39904 DMA2YNL116W 1569 nt7.98□□□□□ -1.13
VPS52P39904 KRE1YNL322C 942 nt7.98□□□□□ -1.13
VPS52P39904 TIP1YBR067C 633 nt7.97□□□□□ -1.13
VPS52P39904 GTB1YDR221W 2109 nt7.97□□□□□ -1.13
VPS52P39904 MRS6YOR370C 1812 nt7.96□□□□□ -1.13
VPS52P39904 SLG1YOR008C 1137 nt7.96□□□□□ -1.14
VPS52P39904 YHL008CYHL008C 1884 nt7.96□□□□□ -1.14
VPS52P39904 YHR219WYHR219W 1875 nt7.96□□□□□ -1.14
VPS52P39904 OPI3YJR073C 621 nt7.95□□□□□ -1.14
VPS52P39904 YLR046CYLR046C 813 nt7.95□□□□□ -1.14
VPS52P39904 SAC7YDR389W 1965 nt7.95□□□□□ -1.14
VPS52P39904 DLD3YEL071W 1491 nt7.94□□□□□ -1.14
VPS52P39904 HXK1YFR053C 1458 nt7.94□□□□□ -1.14
VPS52P39904 GAL2YLR081W 1725 nt7.93□□□□□ -1.14
VPS52P39904 FSH2YMR222C 672 nt7.93□□□□□ -1.14
VPS52P39904 ENO2YHR174W 1314 nt7.93□□□□□ -1.14
VPS52P39904 YKL133CYKL133C 1392 nt7.92□□□□□ -1.14
VPS52P39904 THP3YPR045C 1413 nt7.92□□□□□ -1.14
VPS52P39904 AMF1YOR378W 1548 nt7.92□□□□□ -1.14
VPS52P39904 ITR2YOL103W 1830 nt7.92□□□□□ -1.14
VPS52P39904 YNR064CYNR064C 873 nt7.91□□□□□ -1.14
VPS52P39904 IPL1YPL209C 1104 nt7.91□□□□□ -1.14
VPS52P39904 HEM14YER014W 1620 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)DtA(AGC)D 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)FtA(AGC)F 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)GtA(AGC)G 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)HtA(AGC)H 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)JtA(AGC)J 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)K1tA(AGC)K1 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)K2tA(AGC)K2 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)LtA(AGC)L 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)M1tA(AGC)M1 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)M2tA(AGC)M2 73 nt7.9□□□□□ -1.14
VPS52P39904 tA(AGC)PtA(AGC)P 73 nt7.9□□□□□ -1.14
VPS52P39904 NAS2YIL007C 663 nt7.9□□□□□ -1.14
VPS52P39904 ODC1YPL134C 933 nt7.9□□□□□ -1.14
VPS52P39904 YCP4YCR004C 744 nt7.89□□□□□ -1.15
VPS52P39904 YCR025CYCR025C 411 nt7.89□□□□□ -1.15
VPS52P39904 LSR1LSR1 1175 nt7.89□□□□□ -1.15
VPS52P39904 SPE2YOL052C 1191 nt7.89□□□□□ -1.15
VPS52P39904 PCP1YGR101W 1041 nt7.88□□□□□ -1.15
VPS52P39904 CDD1YLR245C 429 nt7.88□□□□□ -1.15
VPS52P39904 LEU2YCL018W 1095 nt7.88□□□□□ -1.15
VPS52P39904 SSL2YIL143C 2532 nt7.88□□□□□ -1.15
VPS52P39904 ALD5YER073W 1563 nt7.88□□□□□ -1.15
VPS52P39904 TPC1YGR096W 945 nt7.86□□□□□ -1.15
VPS52P39904 YHR218WYHR218W 1812 nt7.86□□□□□ -1.15
VPS52P39904 KEL3YPL263C 1956 nt7.86□□□□□ -1.15
VPS52P39904 RIB1YBL033C 1038 nt7.85□□□□□ -1.15
VPS52P39904 YIA6YIL006W 1122 nt7.84□□□□□ -1.15
VPS52P39904 FLX1YIL134W 936 nt7.84□□□□□ -1.15
VPS52P39904 snR31snR31 225 nt7.83□□□□□ -1.16
VPS52P39904 TOK1YJL093C 2076 nt7.82□□□□□ -1.16
VPS52P39904 ELO1YJL196C 933 nt7.82□□□□□ -1.16
VPS52P39904 MDM35YKL053C-A 261 nt7.82□□□□□ -1.16
VPS52P39904 CYC3YAL039C 810 nt7.81□□□□□ -1.16
VPS52P39904 ADH3YMR083W 1128 nt7.81□□□□□ -1.16
VPS52P39904 SAM50YNL026W 1455 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms