Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DUX4L23-201ENST00000615195 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L24-201ENST00000617576 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L22-201ENST00000618238 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L20-201ENST00000619712 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L21-201ENST00000622058 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L10-201ENST00000622460 1267 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DUX4L25-201ENST00000624915 1269 ntBASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
CSB-PGBD3P0DP91 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
CSB-PGBD3P0DP91 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC35.56■■■■□ 3.28
CSB-PGBD3P0DP91 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC35.53■■■■□ 3.28
CSB-PGBD3P0DP91 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC35.52■■■■□ 3.28
CSB-PGBD3P0DP91 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CSB-PGBD3P0DP91 HES6-205ENST00000409356 528 ntTSL 2 BASIC35.5■■■■□ 3.27
CSB-PGBD3P0DP91 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC35.5■■■■□ 3.27
CSB-PGBD3P0DP91 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.49■■■■□ 3.27
CSB-PGBD3P0DP91 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CSB-PGBD3P0DP91 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.49■■■■□ 3.27
CSB-PGBD3P0DP91 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC35.49■■■■□ 3.27
CSB-PGBD3P0DP91 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CSB-PGBD3P0DP91 EI24-212ENST00000615917 1407 ntTSL 2 BASIC35.48■■■■□ 3.27
CSB-PGBD3P0DP91 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC35.47■■■■□ 3.27
CSB-PGBD3P0DP91 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
CSB-PGBD3P0DP91 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CSB-PGBD3P0DP91 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
CSB-PGBD3P0DP91 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
CSB-PGBD3P0DP91 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.44■■■■□ 3.26
CSB-PGBD3P0DP91 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CSB-PGBD3P0DP91 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CSB-PGBD3P0DP91 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.41■■■■□ 3.26
CSB-PGBD3P0DP91 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.4■■■■□ 3.26
CSB-PGBD3P0DP91 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CSB-PGBD3P0DP91 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
CSB-PGBD3P0DP91 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CSB-PGBD3P0DP91 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC35.39■■■■□ 3.26
CSB-PGBD3P0DP91 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CSB-PGBD3P0DP91 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CSB-PGBD3P0DP91 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.38■■■■□ 3.25
CSB-PGBD3P0DP91 AC120057.4-201ENST00000624722 1615 ntBASIC35.37■■■■□ 3.25
CSB-PGBD3P0DP91 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.37■■■■□ 3.25
CSB-PGBD3P0DP91 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CSB-PGBD3P0DP91 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
CSB-PGBD3P0DP91 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
CSB-PGBD3P0DP91 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.35■■■■□ 3.25
CSB-PGBD3P0DP91 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CSB-PGBD3P0DP91 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC35.34■■■■□ 3.25
CSB-PGBD3P0DP91 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC35.33■■■■□ 3.25
CSB-PGBD3P0DP91 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CSB-PGBD3P0DP91 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC35.32■■■■□ 3.24
CSB-PGBD3P0DP91 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CSB-PGBD3P0DP91 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
CSB-PGBD3P0DP91 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC35.3■■■■□ 3.24
CSB-PGBD3P0DP91 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC35.29■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
CSB-PGBD3P0DP91 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.26■■■■□ 3.24
CSB-PGBD3P0DP91 CHST11-202ENST00000546689 756 ntTSL 2 BASIC35.25■■■■□ 3.23
CSB-PGBD3P0DP91 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
CSB-PGBD3P0DP91 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.23■■■■□ 3.23
CSB-PGBD3P0DP91 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC35.23■■■■□ 3.23
CSB-PGBD3P0DP91 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CSB-PGBD3P0DP91 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.22■■■■□ 3.23
CSB-PGBD3P0DP91 RARRES2P2-201ENST00000394842 485 ntBASIC35.21■■■■□ 3.23
CSB-PGBD3P0DP91 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC35.2■■■■□ 3.23
CSB-PGBD3P0DP91 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC35.2■■■■□ 3.23
CSB-PGBD3P0DP91 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC35.2■■■■□ 3.23
CSB-PGBD3P0DP91 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CSB-PGBD3P0DP91 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
CSB-PGBD3P0DP91 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.19■■■■□ 3.22
CSB-PGBD3P0DP91 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.19■■■■□ 3.22
CSB-PGBD3P0DP91 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CSB-PGBD3P0DP91 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CSB-PGBD3P0DP91 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC35.16■■■■□ 3.22
CSB-PGBD3P0DP91 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CSB-PGBD3P0DP91 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.16■■■■□ 3.22
CSB-PGBD3P0DP91 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
CSB-PGBD3P0DP91 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CSB-PGBD3P0DP91 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC35.14■■■■□ 3.22
CSB-PGBD3P0DP91 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CSB-PGBD3P0DP91 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CSB-PGBD3P0DP91 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.13■■■■□ 3.21
CSB-PGBD3P0DP91 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CSB-PGBD3P0DP91 GPX1-201ENST00000419349 1106 ntBASIC35.13■■■■□ 3.21
CSB-PGBD3P0DP91 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CSB-PGBD3P0DP91 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.12■■■■□ 3.21
CSB-PGBD3P0DP91 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
CSB-PGBD3P0DP91 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC35.11■■■■□ 3.21
CSB-PGBD3P0DP91 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.11■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms