Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CTSDP07339 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSDP07339 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSDP07339 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSDP07339 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTSDP07339 AL121749.1-202ENST00000609313 2153 ntBASIC21.75■■□□□ 1.07
CTSDP07339 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CTSDP07339 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CTSDP07339 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTSDP07339 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTSDP07339 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSDP07339 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSDP07339 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSDP07339 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.72■■□□□ 1.07
CTSDP07339 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.71■■□□□ 1.07
CTSDP07339 AL031258.1-201ENST00000623562 325 ntBASIC21.71■■□□□ 1.07
CTSDP07339 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.71■■□□□ 1.07
CTSDP07339 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CTSDP07339 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSDP07339 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSDP07339 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSDP07339 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSDP07339 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSDP07339 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSDP07339 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSDP07339 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSDP07339 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSDP07339 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSDP07339 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSDP07339 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSDP07339 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSDP07339 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTSDP07339 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSDP07339 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CTSDP07339 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSDP07339 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.64■■□□□ 1.06
CTSDP07339 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSDP07339 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CTSDP07339 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSDP07339 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSDP07339 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
CTSDP07339 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSDP07339 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CTSDP07339 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.61■■□□□ 1.05
CTSDP07339 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSDP07339 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CTSDP07339 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSDP07339 WASH5P-204ENST00000632292 975 ntBASIC21.6■■□□□ 1.05
CTSDP07339 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.59■■□□□ 1.05
CTSDP07339 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSDP07339 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSDP07339 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CTSDP07339 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CTSDP07339 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTSDP07339 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CTSDP07339 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.55■■□□□ 1.04
CTSDP07339 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CTSDP07339 AC010864.1-201ENST00000609407 1511 ntBASIC21.55■■□□□ 1.04
CTSDP07339 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.54■■□□□ 1.04
CTSDP07339 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CTSDP07339 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTSDP07339 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 BX255925.1-201ENST00000566954 1854 ntBASIC21.52■■□□□ 1.04
CTSDP07339 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CTSDP07339 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTSDP07339 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSDP07339 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.51■■□□□ 1.03
CTSDP07339 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms