Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA1O95477 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA1O95477 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ABCA1O95477 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.06■■□□□ 1.12
ABCA1O95477 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.06■■□□□ 1.12
ABCA1O95477 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ABCA1O95477 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L13-201ENST00000554103 1267 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L15-201ENST00000611059 1267 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L23-201ENST00000615195 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L24-201ENST00000617576 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L22-201ENST00000618238 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L20-201ENST00000619712 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L21-201ENST00000622058 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L10-201ENST00000622460 1267 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 DUX4L25-201ENST00000624915 1269 ntBASIC22.05■■□□□ 1.12
ABCA1O95477 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ABCA1O95477 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.05■■□□□ 1.12
ABCA1O95477 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA1O95477 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA1O95477 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA1O95477 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA1O95477 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.02■■□□□ 1.12
ABCA1O95477 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
ABCA1O95477 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.01■■□□□ 1.11
ABCA1O95477 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA1O95477 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA1O95477 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22■■□□□ 1.11
ABCA1O95477 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA1O95477 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCA1O95477 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA1O95477 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
ABCA1O95477 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCA1O95477 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA1O95477 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA1O95477 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.98■■□□□ 1.11
ABCA1O95477 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.98■■□□□ 1.11
ABCA1O95477 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA1O95477 RARRES2P2-201ENST00000394842 485 ntBASIC21.95■■□□□ 1.1
ABCA1O95477 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA1O95477 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ABCA1O95477 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
ABCA1O95477 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA1O95477 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.93■■□□□ 1.1
ABCA1O95477 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ABCA1O95477 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.92■■□□□ 1.1
ABCA1O95477 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA1O95477 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA1O95477 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA1O95477 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA1O95477 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA1O95477 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA1O95477 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCA1O95477 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCA1O95477 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
ABCA1O95477 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.89■■□□□ 1.09
ABCA1O95477 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA1O95477 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCA1O95477 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA1O95477 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA1O95477 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA1O95477 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA1O95477 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA1O95477 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA1O95477 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA1O95477 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA1O95477 ABHD17AP5-201ENST00000580133 923 ntBASIC21.85■■□□□ 1.09
ABCA1O95477 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA1O95477 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA1O95477 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ABCA1O95477 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.83■■□□□ 1.08
ABCA1O95477 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.82■■□□□ 1.08
ABCA1O95477 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA1O95477 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ABCA1O95477 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.81■■□□□ 1.08
ABCA1O95477 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA1O95477 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.81■■□□□ 1.08
ABCA1O95477 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ABCA1O95477 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA1O95477 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.8■■□□□ 1.08
ABCA1O95477 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA1O95477 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA1O95477 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ABCA1O95477 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.78■■□□□ 1.08
ABCA1O95477 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.78■■□□□ 1.08
ABCA1O95477 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA1O95477 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.77■■□□□ 1.08
ABCA1O95477 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA1O95477 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.77■■□□□ 1.08
ABCA1O95477 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.77■■□□□ 1.08
ABCA1O95477 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA1O95477 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA1O95477 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA1O95477 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA1O95477 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms