Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
H3BM21 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.22■■□□□ 1.79
H3BM21 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.21■■□□□ 1.79
H3BM21 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 MIR6090-201ENST00000622481 60 ntBASIC26.21■■□□□ 1.79
H3BM21 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
H3BM21 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
H3BM21 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.18■■□□□ 1.78
H3BM21 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
H3BM21 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.17■■□□□ 1.78
H3BM21 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
H3BM21 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
H3BM21 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
H3BM21 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
H3BM21 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
H3BM21 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
H3BM21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
H3BM21 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.14■■□□□ 1.78
H3BM21 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
H3BM21 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
H3BM21 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.11■■□□□ 1.77
H3BM21 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.1■■□□□ 1.77
H3BM21 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
H3BM21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
H3BM21 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.09■■□□□ 1.77
H3BM21 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.08■■□□□ 1.77
H3BM21 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
H3BM21 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.07■■□□□ 1.76
H3BM21 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
H3BM21 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.06■■□□□ 1.76
H3BM21 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.06■■□□□ 1.76
H3BM21 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
H3BM21 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
H3BM21 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
H3BM21 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
H3BM21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.03■■□□□ 1.76
H3BM21 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
H3BM21 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.02■■□□□ 1.76
H3BM21 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
H3BM21 LINC01971-201ENST00000617888 1048 ntBASIC26.02■■□□□ 1.76
H3BM21 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
H3BM21 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
H3BM21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
H3BM21 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.99■■□□□ 1.75
H3BM21 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
H3BM21 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.99■■□□□ 1.75
H3BM21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.99■■□□□ 1.75
H3BM21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.98■■□□□ 1.75
H3BM21 DUX4L11-201ENST00000611504 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 DUX4L12-201ENST00000614593 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 DUX4L14-201ENST00000621227 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
H3BM21 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.96■■□□□ 1.75
H3BM21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.96■■□□□ 1.75
H3BM21 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.96■■□□□ 1.75
H3BM21 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
H3BM21 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
H3BM21 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 MIR639-201ENST00000384974 98 ntBASIC25.95■■□□□ 1.74
H3BM21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.95■■□□□ 1.74
H3BM21 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
H3BM21 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
H3BM21 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.94■■□□□ 1.74
H3BM21 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
H3BM21 MIR3648-2-201ENST00000581792 180 ntBASIC25.93■■□□□ 1.74
H3BM21 MIR3648-1-201ENST00000615959 180 ntBASIC25.93■■□□□ 1.74
H3BM21 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.93■■□□□ 1.74
H3BM21 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.92■■□□□ 1.74
H3BM21 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
H3BM21 MIR4449-201ENST00000578365 66 ntBASIC25.91■■□□□ 1.74
H3BM21 AC016575.1-201ENST00000607026 382 ntBASIC25.91■■□□□ 1.74
H3BM21 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
H3BM21 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
H3BM21 AL135925.1-201ENST00000605920 1701 ntBASIC25.9■■□□□ 1.74
H3BM21 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms