Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRDV1A0A1B0GX56 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TRDV1A0A1B0GX56 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRDV1A0A1B0GX56 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRDV1A0A1B0GX56 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRDV1A0A1B0GX56 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRDV1A0A1B0GX56 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRDV1A0A1B0GX56 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
TRDV1A0A1B0GX56 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.16■■□□□ 1.3
TRDV1A0A1B0GX56 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.15■■□□□ 1.3
TRDV1A0A1B0GX56 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRDV1A0A1B0GX56 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRDV1A0A1B0GX56 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRDV1A0A1B0GX56 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRDV1A0A1B0GX56 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRDV1A0A1B0GX56 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRDV1A0A1B0GX56 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TRDV1A0A1B0GX56 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRDV1A0A1B0GX56 AC006077.2-201ENST00000623591 457 ntBASIC23.11■■□□□ 1.29
TRDV1A0A1B0GX56 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.11■■□□□ 1.29
TRDV1A0A1B0GX56 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.11■■□□□ 1.29
TRDV1A0A1B0GX56 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRDV1A0A1B0GX56 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRDV1A0A1B0GX56 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRDV1A0A1B0GX56 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRDV1A0A1B0GX56 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.08■■□□□ 1.29
TRDV1A0A1B0GX56 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRDV1A0A1B0GX56 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRDV1A0A1B0GX56 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRDV1A0A1B0GX56 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRDV1A0A1B0GX56 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRDV1A0A1B0GX56 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.06■■□□□ 1.28
TRDV1A0A1B0GX56 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRDV1A0A1B0GX56 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRDV1A0A1B0GX56 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRDV1A0A1B0GX56 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRDV1A0A1B0GX56 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRDV1A0A1B0GX56 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.04■■□□□ 1.28
TRDV1A0A1B0GX56 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRDV1A0A1B0GX56 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRDV1A0A1B0GX56 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TRDV1A0A1B0GX56 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.01■■□□□ 1.27
TRDV1A0A1B0GX56 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRDV1A0A1B0GX56 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.01■■□□□ 1.27
TRDV1A0A1B0GX56 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRDV1A0A1B0GX56 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23■■□□□ 1.27
TRDV1A0A1B0GX56 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRDV1A0A1B0GX56 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRDV1A0A1B0GX56 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23■■□□□ 1.27
TRDV1A0A1B0GX56 AC135731.1-201ENST00000569415 2548 ntBASIC22.99■■□□□ 1.27
TRDV1A0A1B0GX56 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRDV1A0A1B0GX56 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.97■■□□□ 1.27
TRDV1A0A1B0GX56 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRDV1A0A1B0GX56 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRDV1A0A1B0GX56 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRDV1A0A1B0GX56 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
TRDV1A0A1B0GX56 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
TRDV1A0A1B0GX56 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRDV1A0A1B0GX56 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRDV1A0A1B0GX56 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRDV1A0A1B0GX56 BX255925.1-201ENST00000566954 1854 ntBASIC22.94■■□□□ 1.26
TRDV1A0A1B0GX56 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRDV1A0A1B0GX56 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.93■■□□□ 1.26
TRDV1A0A1B0GX56 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRDV1A0A1B0GX56 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 DYNLL1-208ENST00000550178 581 ntBASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TRDV1A0A1B0GX56 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms