Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF103-CHMP3A0A140T963 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF103-CHMP3A0A140T963 AL135925.1-201ENST00000605920 1701 ntBASIC25■■□□□ 1.59
RNF103-CHMP3A0A140T963 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF103-CHMP3A0A140T963 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RNF103-CHMP3A0A140T963 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF103-CHMP3A0A140T963 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 AC142086.6-201ENST00000621154 1765 ntBASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.97■■□□□ 1.59
RNF103-CHMP3A0A140T963 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF103-CHMP3A0A140T963 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RNF103-CHMP3A0A140T963 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
RNF103-CHMP3A0A140T963 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF103-CHMP3A0A140T963 SETD8P1-201ENST00000623146 1180 ntBASIC24.94■■□□□ 1.58
RNF103-CHMP3A0A140T963 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.94■■□□□ 1.58
RNF103-CHMP3A0A140T963 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF103-CHMP3A0A140T963 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF103-CHMP3A0A140T963 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF103-CHMP3A0A140T963 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RNF103-CHMP3A0A140T963 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF103-CHMP3A0A140T963 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RNF103-CHMP3A0A140T963 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF103-CHMP3A0A140T963 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF103-CHMP3A0A140T963 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF103-CHMP3A0A140T963 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF103-CHMP3A0A140T963 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF103-CHMP3A0A140T963 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF103-CHMP3A0A140T963 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF103-CHMP3A0A140T963 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF103-CHMP3A0A140T963 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF103-CHMP3A0A140T963 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF103-CHMP3A0A140T963 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF103-CHMP3A0A140T963 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF103-CHMP3A0A140T963 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF103-CHMP3A0A140T963 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RNF103-CHMP3A0A140T963 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RNF103-CHMP3A0A140T963 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF103-CHMP3A0A140T963 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF103-CHMP3A0A140T963 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF103-CHMP3A0A140T963 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF103-CHMP3A0A140T963 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF103-CHMP3A0A140T963 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF103-CHMP3A0A140T963 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF103-CHMP3A0A140T963 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
RNF103-CHMP3A0A140T963 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF103-CHMP3A0A140T963 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RNF103-CHMP3A0A140T963 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.56
RNF103-CHMP3A0A140T963 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF103-CHMP3A0A140T963 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF103-CHMP3A0A140T963 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
RNF103-CHMP3A0A140T963 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF103-CHMP3A0A140T963 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF103-CHMP3A0A140T963 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF103-CHMP3A0A140T963 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF103-CHMP3A0A140T963 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF103-CHMP3A0A140T963 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF103-CHMP3A0A140T963 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.77■■□□□ 1.56
RNF103-CHMP3A0A140T963 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RNF103-CHMP3A0A140T963 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.76■■□□□ 1.55
RNF103-CHMP3A0A140T963 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF103-CHMP3A0A140T963 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF103-CHMP3A0A140T963 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF103-CHMP3A0A140T963 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF103-CHMP3A0A140T963 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF103-CHMP3A0A140T963 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF103-CHMP3A0A140T963 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF103-CHMP3A0A140T963 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
RNF103-CHMP3A0A140T963 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF103-CHMP3A0A140T963 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF103-CHMP3A0A140T963 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.69■■□□□ 1.54
RNF103-CHMP3A0A140T963 AL391121.1-201ENST00000607967 1349 ntBASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 AC010864.1-201ENST00000609407 1511 ntBASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms