Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 PHBP20-201ENST00000603694 818 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC005185.1-201ENST00000604248 787 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC018648.1-201ENST00000608314 668 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 GRIA3-206ENST00000616590 784 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL008638.6-201ENST00000623947 4254 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL136140.2-201ENST00000624717 1705 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL022323.2-201ENST00000623239 3000 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 SOCS5P2-201ENST00000449637 1359 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 TNNT3-208ENST00000397301 818 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 RNU6-233P-201ENST00000410845 141 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 RNA5SP209-201ENST00000411237 97 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AL353705.3-201ENST00000418694 1250 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC073465.3-201ENST00000448468 405 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 RN7SL159P-201ENST00000485164 292 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 RAET1E-205ENST00000529948 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC009101.2-202ENST00000564851 490 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 MIR4518-201ENST00000580665 83 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 MIR4664-201ENST00000583819 71 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 AP005265.1-201ENST00000584914 872 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 LINC01926-201ENST00000589476 478 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 SCGB2B3P-201ENST00000599388 409 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 Z97987.1-201ENST00000618051 433 ntTSL 3 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 AL158206.1-201ENST00000563205 1965 ntBASIC8.1□□□□□ -1.11
SNX18Q96RF0 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNX18Q96RF0 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SNX18Q96RF0 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC012377.1-202ENST00000558675 4811 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC079341.1-201ENST00000567769 2266 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms