Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC245291.2-201ENST00000451224 1651 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 C3P1-202ENST00000497718 4954 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC078795.1-201ENST00000602342 3143 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 XRCC6P1-201ENST00000420392 1805 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC012513.3-201ENST00000623250 2116 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 Z82209.2-201ENST00000623410 2012 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AL136087.1-201ENST00000305491 426 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 RN7SL449P-201ENST00000464937 286 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 RN7SL7P-201ENST00000467823 298 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 ILF2P1-201ENST00000486302 1168 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 OR7E28P-201ENST00000505191 975 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 SEMA6A-AS1-201ENST00000507558 436 ntTSL 3 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC011726.1-201ENST00000515686 669 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 IGLVI-38-201ENST00000519982 385 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 ACTBP6-201ENST00000520036 1090 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 COX7B2-204ENST00000543208 587 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC119751.8-201ENST00000597032 156 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 LINC00506-204ENST00000630120 587 ntTSL 4 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 HSPA8P6-201ENST00000451965 1552 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 AC011297.1-201ENST00000620503 2110 ntBASIC8.12□□□□□ -1.11
SNX18Q96RF0 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 SP100-206ENST00000409897 2037 ntTSL 2 BASIC8.12□□□□□ -1.11
SNX18Q96RF0 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNX18Q96RF0 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AP000542.3-201ENST00000623391 6114 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC013652.1-201ENST00000560197 1378 ntTSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 OR7E122P-202ENST00000641144 6171 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 RPL35-202ENST00000373570 493 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC004448.4-209ENST00000421796 684 ntTSL 5 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL023773.1-201ENST00000423985 1124 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNX18Q96RF0 SNRPCP1-201ENST00000433292 458 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 GAPDHP68-201ENST00000434621 1008 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL356277.3-202ENST00000436672 587 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 RPSAP41-201ENST00000439695 860 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 DEFT1P2-201ENST00000453669 421 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 TUBB4BP5-201ENST00000512282 427 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AP003122.1-201ENST00000527402 755 ntBASIC8.11□□□□□ -1.11
SNX18Q96RF0 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 AC100826.1-201ENST00000558010 890 ntTSL 2 BASIC8.11□□□□□ -1.11
SNX18Q96RF0 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms