Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPLP0P2-206ENST00000496593 3525 ntTSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 MAPK10-375ENST00000641989 2331 ntBASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AC079331.2-201ENST00000623462 2546 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 RP1-206ENST00000636932 3649 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 LEUTX-201ENST00000396841 671 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 MPTX1-201ENST00000480235 609 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 RN7SL687P-201ENST00000480496 285 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC080188.1-201ENST00000491923 567 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 OR10J8P-201ENST00000504659 929 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC055716.1-201ENST00000550077 495 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 EIF4EBP1P1-201ENST00000557776 341 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 CYP4A26P-201ENST00000563017 196 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AL133351.4-201ENST00000604204 631 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AL080285.2-201ENST00000612765 458 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC074043.1-201ENST00000483126 1776 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 EIF4BP5-201ENST00000567338 1795 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 MAPK10-382ENST00000642023 2369 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 AC090241.3-201ENST00000621730 2599 ntBASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPIPA3F8WFD2 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 MIR296-201ENST00000385215 80 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 LYPLA2P3-201ENST00000417429 576 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 RPL22P11-201ENST00000434894 385 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC006463.1-201ENST00000445929 232 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 HNRNPA1P31-201ENST00000448627 970 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms