Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 USP46-207ENST00000508499 1419 ntTSL 2 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PCDHA10-203ENST00000562220 12358 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 CCT5P1-201ENST00000502314 1618 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 SNORA58.1-201ENST00000364133 136 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 RBMY2OP-201ENST00000447105 810 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 RN7SL541P-201ENST00000464317 283 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC110994.1-201ENST00000468519 406 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC110027.1-201ENST00000557753 403 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC013565.2-201ENST00000564874 310 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC093249.5-201ENST00000568120 430 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 uc_338.3-201ENST00000613268 181 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC119619.1-201ENST00000619728 112 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AL136038.5-201ENST00000620835 554 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC010223.1-201ENST00000625092 279 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 KRT7-214ENST00000638501 398 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 MCC-209ENST00000515367 3844 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 AC005538.2-201ENST00000623215 1864 ntBASIC9.32□□□□□ -0.92
LMO3Q8TAP4 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC9.32□□□□□ -0.92
LMO3Q8TAP4 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 ADAM21P1-201ENST00000529267 2170 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 HERC2P8-202ENST00000564334 3705 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 RCL1-201ENST00000381728 758 ntTSL 3 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 KRTAP9-1-201ENST00000398470 753 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 RN7SKP169-201ENST00000411124 291 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 RPSAP8-201ENST00000429844 889 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC011998.2-201ENST00000430884 473 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 TSSK1A-201ENST00000450724 768 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 DAP3P2-201ENST00000458547 510 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 RN7SL302P-201ENST00000475999 300 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 RASA4-217ENST00000538869 483 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AL356458.1-201ENST00000604764 465 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 SRGAP2D-201ENST00000605551 1021 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AC025031.3-201ENST00000611566 368 ntBASIC9.31□□□□□ -0.92
LMO3Q8TAP4 ALG13-226ENST00000622986 582 ntTSL 2 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC9.31□□□□□ -0.92
LMO3Q8TAP4 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms