Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC018761.3-201ENST00000590065 388 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC123912.3-201ENST00000600907 1367 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC009303.4-201ENST00000623784 1500 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC016542.2-201ENST00000624201 619 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC007529.2-201ENST00000637435 1094 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC131392.2-201ENST00000505635 4332 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 KNOP1P5-201ENST00000358374 1378 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 LIFR-AS1-202ENST00000500817 1342 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CNST-201ENST00000366511 645 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 MED20-203ENST00000409060 815 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC012501.1-203ENST00000424322 586 ntTSL 4 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 OR13D2P-201ENST00000430667 907 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC136896.1-201ENST00000438334 547 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 NDUFA5P3-201ENST00000449348 345 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 ASS1P12-201ENST00000452496 1227 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CREM-237ENST00000488328 1049 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 GJA1P1-201ENST00000511478 1143 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 HMGN1P31-201ENST00000590085 304 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 uc_338.27-201ENST00000611385 169 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 AC244255.1-201ENST00000613463 398 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 SYN3-213ENST00000619146 561 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 Metazoa_SRP.164-201ENST00000620748 331 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 OR5G5P-204ENST00000627642 621 ntBASIC8.15□□□□□ -1.1
SNX18Q96RF0 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNX18Q96RF0 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.15□□□□□ -1.1
SNX18Q96RF0 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
SNX18Q96RF0 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SNX18Q96RF0 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNX18Q96RF0 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
SNX18Q96RF0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SNX18Q96RF0 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
SNX18Q96RF0 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
SNX18Q96RF0 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNX18Q96RF0 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CD200-203ENST00000473539 1524 ntTSL 2 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms