Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 AC087885.1-201ENST00000641910 848 ntBASIC9□□□□□ -0.97
NCDNQ9UBB6 LRRC37A4P-202ENST00000581296 5372 ntBASIC9□□□□□ -0.97
NCDNQ9UBB6 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
NCDNQ9UBB6 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC9□□□□□ -0.97
NCDNQ9UBB6 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC9□□□□□ -0.97
NCDNQ9UBB6 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9□□□□□ -0.97
NCDNQ9UBB6 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 SLC2A3P2-201ENST00000331747 1480 ntBASIC9□□□□□ -0.97
NCDNQ9UBB6 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC9□□□□□ -0.97
NCDNQ9UBB6 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC9□□□□□ -0.97
NCDNQ9UBB6 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
NCDNQ9UBB6 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC9□□□□□ -0.97
NCDNQ9UBB6 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC9□□□□□ -0.97
NCDNQ9UBB6 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 WBP11P1-202ENST00000567636 2972 ntBASIC9□□□□□ -0.97
NCDNQ9UBB6 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC9□□□□□ -0.97
NCDNQ9UBB6 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 C10orf126-201ENST00000375520 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 SS18-205ENST00000542420 2321 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 EEF1A1P2-201ENST00000553854 1447 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 RTL1-201ENST00000534062 4193 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 RFKP1-201ENST00000400940 428 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC018641.1-201ENST00000435950 796 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AL772284.1-201ENST00000443421 905 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AL353072.1-201ENST00000446021 442 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 SFTPA3P-201ENST00000446429 367 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 SEPT14P1-201ENST00000458703 648 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC020658.1-201ENST00000471253 938 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 MTND6P17-201ENST00000511811 519 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AL109628.2-201ENST00000554037 201 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC004706.2-201ENST00000576277 294 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC005077.4-201ENST00000421546 3495 ntBASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 HK1-206ENST00000448642 3868 ntTSL 5 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
NCDNQ9UBB6 AC005176.1-201ENST00000594263 1831 ntTSL 2 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 AC026877.1-201ENST00000476047 1411 ntBASIC8.98□□□□□ -0.97
NCDNQ9UBB6 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 SNORA68B-201ENST00000364518 133 ntBASIC8.98□□□□□ -0.97
NCDNQ9UBB6 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NCDNQ9UBB6 PPIAP2-201ENST00000414143 492 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms