Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GSTO3P-201ENST00000504733 718 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC9.45□□□□□ -0.9
MTHFRP42898 NBPF5P-202ENST00000545941 1032 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC9.45□□□□□ -0.9
MTHFRP42898 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC9.45□□□□□ -0.9
MTHFRP42898 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC9.45□□□□□ -0.9
MTHFRP42898 AF067845.1-201ENST00000567210 1192 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC9.45□□□□□ -0.9
MTHFRP42898 AL021808.1-201ENST00000604325 1117 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 ELMO2P1-202ENST00000614283 794 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 AC009053.4-201ENST00000614366 108 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 OR7G15P-201ENST00000617262 333 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
MTHFRP42898 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC9.45□□□□□ -0.9
MTHFRP42898 OR7A2P-202ENST00000641312 1219 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 ASNSP1-202ENST00000641079 1352 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 CSF2RA-202ENST00000355805 1410 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC9.45□□□□□ -0.9
MTHFRP42898 ASH2LP2-201ENST00000453999 1561 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 WBP11P1-202ENST00000567636 2972 ntBASIC9.45□□□□□ -0.9
MTHFRP42898 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.45□□□□□ -0.9
MTHFRP42898 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.45□□□□□ -0.9
MTHFRP42898 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
MTHFRP42898 RPE-201ENST00000354506 3165 ntTSL 2 BASIC9.45□□□□□ -0.9
MTHFRP42898 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 C10orf126-202ENST00000614533 1968 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC9.44□□□□□ -0.9
MTHFRP42898 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
MTHFRP42898 AC096720.2-201ENST00000623308 2458 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.44□□□□□ -0.9
MTHFRP42898 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 RIT1-201ENST00000368322 855 ntTSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 RN7SKP264-201ENST00000411080 289 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 FYTTD1P1-201ENST00000424250 921 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 CICP10-201ENST00000439497 198 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AP006193.1-201ENST00000440724 485 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AC078845.1-201ENST00000445293 889 ntTSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 RPL12P37-201ENST00000486874 495 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 AP006587.2-201ENST00000530696 493 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 AL133163.2-201ENST00000555024 624 ntTSL 3 BASIC9.44□□□□□ -0.9
MTHFRP42898 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 OR13Z2P-201ENST00000606338 555 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AL136304.1-201ENST00000607790 509 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AC004839.1-201ENST00000610269 501 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 AL590491.1-202ENST00000618038 394 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 SPRY4-IT1-201ENST00000630558 703 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC9.44□□□□□ -0.9
MTHFRP42898 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 AL662907.3-201ENST00000641271 1932 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC9.44□□□□□ -0.9
MTHFRP42898 MAPK10-386ENST00000642038 2354 ntBASIC9.44□□□□□ -0.9
MTHFRP42898 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC9.44□□□□□ -0.9
MTHFRP42898 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MTHFRP42898 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC9.43□□□□□ -0.9
MTHFRP42898 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MTHFRP42898 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 F11-202ENST00000264692 1916 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 PRAMEF30P-201ENST00000438176 1417 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC105233.5-202ENST00000642083 4132 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms