Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 BCL2L2-206ENST00000557579 596 ntTSL 312.79□□□□□ -0.369e-7■■□□□ 14.3
PRPF8Q6P2Q9 PHYKPL-214ENST00000506045 731 ntTSL 511.02□□□□□ -0.659e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.278e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.35□□□□□ -0.278e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-206ENST00000530019 550 ntTSL 413.35□□□□□ -0.278e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-211ENST00000534719 788 ntTSL 1 (best)11.82□□□□□ -0.528e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-210ENST00000534180 983 ntTSL 211.59□□□□□ -0.558e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-205ENST00000529631 507 ntTSL 4 BASIC10.94□□□□□ -0.668e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-208ENST00000532829 912 ntTSL 210.35□□□□□ -0.758e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-203ENST00000529191 530 ntTSL 2 BASIC9.62□□□□□ -0.878e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-209ENST00000533138 885 ntTSL 59.62□□□□□ -0.878e-9■■□□□ 14.3
PRPF8Q6P2Q9 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.28e-9■■□□□ 14.3
PRPF8Q6P2Q9 STARD10-219ENST00000544767 509 ntTSL 313.25□□□□□ -0.298e-8■■□□□ 14.3
PRPF8Q6P2Q9 STARD10-209ENST00000537351 426 ntTSL 37.01□□□□□ -1.298e-8■■□□□ 14.3
PRPF8Q6P2Q9 STARD10-208ENST00000536728 451 ntTSL 55.54□□□□□ -1.528e-8■■□□□ 14.3
PRPF8Q6P2Q9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.99□□□□□ -0.011e-13■■□□□ 14.3
PRPF8Q6P2Q9 AC011530.1-203ENST00000597712 432 ntTSL 212.96□□□□□ -0.331e-13■■□□□ 14.3
PRPF8Q6P2Q9 AC011530.1-204ENST00000595946 321 ntAPPRIS ALT2 TSL 211.85□□□□□ -0.511e-13■■□□□ 14.3
PRPF8Q6P2Q9 AC011530.1-202ENST00000596586 397 ntAPPRIS P5 TSL 211.85□□□□□ -0.511e-13■■□□□ 14.3
PRPF8Q6P2Q9 NUMB-208ENST00000554014 1714 ntTSL 27.73□□□□□ -1.172e-7■■□□□ 14.3
PRPF8Q6P2Q9 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC6.61□□□□□ -1.352e-7■■□□□ 14.3
PRPF8Q6P2Q9 ZNF783-205ENST00000489518 763 ntTSL 312.19□□□□□ -0.462e-6■■□□□ 14.3
PRPF8Q6P2Q9 HNRNPH1-242ENST00000522256 492 ntTSL 413.24□□□□□ -0.292e-36■■□□□ 14.3
PRPF8Q6P2Q9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.092e-11■■□□□ 14.3
PRPF8Q6P2Q9 MRPS15-202ENST00000462067 1612 ntTSL 28.24□□□□□ -1.092e-11■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.995e-7■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.55e-7■■□□□ 14.3
PRPF8Q6P2Q9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.345e-7■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-7■■□□□ 14.3
PRPF8Q6P2Q9 ANAPC5-217ENST00000541652 753 ntTSL 24.73□□□□□ -1.656e-10■■□□□ 14.3
PRPF8Q6P2Q9 MST1-209ENST00000484269 1518 ntTSL 515.55■□□□□ 0.083e-7■■□□□ 14.3
PRPF8Q6P2Q9 MST1-215ENST00000492329 2006 ntTSL 514.94□□□□□ -0.023e-7■■□□□ 14.3
PRPF8Q6P2Q9 ZSWIM8-214ENST00000603187 3713 ntTSL 1 (best)10.99□□□□□ -0.652e-6■■□□□ 14.3
PRPF8Q6P2Q9 ZSWIM8-202ENST00000412198 3611 ntTSL 210.36□□□□□ -0.752e-6■■□□□ 14.3
PRPF8Q6P2Q9 ZSWIM8-222ENST00000604754 3369 ntTSL 1 (best)9.58□□□□□ -0.882e-6■■□□□ 14.3
PRPF8Q6P2Q9 ACAP3-212ENST00000492936 5319 ntTSL 1 (best)14.04□□□□□ -0.166e-7■■□□□ 14.3
PRPF8Q6P2Q9 ARFGAP2-218ENST00000528708 550 ntTSL 39.02□□□□□ -0.979e-9■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.494e-7■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC11.35□□□□□ -0.594e-7■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.624e-7■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-211ENST00000573196 739 ntTSL 29.33□□□□□ -0.924e-7■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC8.43□□□□□ -1.064e-7■■□□□ 14.3
PRPF8Q6P2Q9 YWHAE-202ENST00000466227 1377 ntTSL 57.34□□□□□ -1.231e-6■■□□□ 14.3
PRPF8Q6P2Q9 EP400NL-214ENST00000641289 2402 ntBASIC16.55■□□□□ 0.242e-6■■□□□ 14.3
PRPF8Q6P2Q9 TMEM94-205ENST00000577247 922 ntTSL 512.56□□□□□ -0.43e-6■■□□□ 14.3
PRPF8Q6P2Q9 FLOT1-210ENST00000484168 1101 ntTSL 518.55■□□□□ 0.562e-9■■□□□ 14.3
PRPF8Q6P2Q9 FLOT1-207ENST00000454845 629 ntTSL 313.09□□□□□ -0.312e-9■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-217ENST00000476541 513 ntTSL 315.55■□□□□ 0.082e-7■■□□□ 14.3
PRPF8Q6P2Q9 UBE2G2-212ENST00000497664 590 ntTSL 417.82■□□□□ 0.446e-7■■□□□ 14.3
PRPF8Q6P2Q9 MED24-232ENST00000585249 511 ntTSL 410.51□□□□□ -0.731e-7■■□□□ 14.3
PRPF8Q6P2Q9 MED24-217ENST00000577488 572 ntTSL 410.3□□□□□ -0.761e-7■■□□□ 14.3
PRPF8Q6P2Q9 NCAPH2-208ENST00000522048 1069 ntTSL 214.71□□□□□ -0.051e-7■■□□□ 14.3
PRPF8Q6P2Q9 NCAPH2-207ENST00000520297 539 ntTSL 514.39□□□□□ -0.111e-7■■□□□ 14.3
PRPF8Q6P2Q9 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)15.35■□□□□ 0.053e-7■■□□□ 14.3
PRPF8Q6P2Q9 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.4□□□□□ -0.743e-7■■□□□ 14.3
PRPF8Q6P2Q9 VARS2-204ENST00000467717 863 ntTSL 314.08□□□□□ -0.164e-8■■□□□ 14.3
PRPF8Q6P2Q9 VARS2-203ENST00000428017 1103 ntTSL 212.42□□□□□ -0.424e-8■■□□□ 14.3
PRPF8Q6P2Q9 SRSF11-213ENST00000481648 389 ntTSL 38.72□□□□□ -1.011e-7■■□□□ 14.3
PRPF8Q6P2Q9 CYFIP2-220ENST00000617629 967 ntTSL 310.71□□□□□ -0.697e-7■■□□□ 14.3
PRPF8Q6P2Q9 PHYKPL-206ENST00000476487 2251 ntTSL 211.45□□□□□ -0.584e-7■■□□□ 14.3
PRPF8Q6P2Q9 PHYKPL-207ENST00000481436 2025 ntTSL 210.39□□□□□ -0.754e-7■■□□□ 14.3
PRPF8Q6P2Q9 SLC38A10-210ENST00000573058 1627 nt20.19■□□□□ 0.821e-18■■□□□ 14.3
PRPF8Q6P2Q9 SLC38A10-206ENST00000540966 896 ntTSL 314.57□□□□□ -0.081e-18■■□□□ 14.3
PRPF8Q6P2Q9 SLC38A10-211ENST00000576151 774 ntTSL 213.61□□□□□ -0.231e-18■■□□□ 14.3
PRPF8Q6P2Q9 PRDX1-206ENST00000483583 530 ntTSL 219.26■□□□□ 0.671e-7■■□□□ 14.3
PRPF8Q6P2Q9 TCIRG1-203ENST00000524870 830 ntTSL 1 (best)18.73■□□□□ 0.597e-10■■□□□ 14.3
PRPF8Q6P2Q9 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.113e-7■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-207ENST00000555762 5573 ntTSL 1 (best)8.39□□□□□ -1.077e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC7.39□□□□□ -1.237e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC7.11□□□□□ -1.275e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC6.44□□□□□ -1.387e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.37□□□□□ -1.397e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC6.09□□□□□ -1.437e-8■■□□□ 14.3
PRPF8Q6P2Q9 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.487e-8■■□□□ 14.3
PRPF8Q6P2Q9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.481e-7■■□□□ 14.3
PRPF8Q6P2Q9 ESRP2-201ENST00000251366 3228 ntTSL 1 (best)9.79□□□□□ -0.841e-7■■□□□ 14.3
PRPF8Q6P2Q9 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.921e-7■■□□□ 14.3
PRPF8Q6P2Q9 SLC26A6-216ENST00000469693 574 ntTSL 37.75□□□□□ -1.175e-13■■□□□ 14.3
PRPF8Q6P2Q9 MVD-216ENST00000568709 809 ntTSL 515.62■□□□□ 0.093e-10■■□□□ 14.3
PRPF8Q6P2Q9 TMEM143-209ENST00000598926 541 ntTSL 515.8■□□□□ 0.121e-7■■□□□ 14.3
PRPF8Q6P2Q9 TMEM143-205ENST00000595720 1094 ntTSL 215.04■□□□□ -01e-7■■□□□ 14.3
PRPF8Q6P2Q9 TMEM143-212ENST00000601332 857 ntTSL 214.31□□□□□ -0.121e-7■■□□□ 14.3
PRPF8Q6P2Q9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.37□□□□□ -0.118e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.368e-9■■□□□ 14.3
PRPF8Q6P2Q9 PSMD4-207ENST00000461434 801 ntTSL 29.31□□□□□ -0.922e-7■■□□□ 14.3
PRPF8Q6P2Q9 MTDH-206ENST00000522313 672 ntTSL 48.13□□□□□ -1.118e-9■■□□□ 14.3
PRPF8Q6P2Q9 DENND5A-216ENST00000533737 743 ntTSL 311.4□□□□□ -0.586e-8■■□□□ 14.3
PRPF8Q6P2Q9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.512e-6■■□□□ 14.3
PRPF8Q6P2Q9 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.542e-6■■□□□ 14.3
PRPF8Q6P2Q9 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.712e-6■■□□□ 14.3
PRPF8Q6P2Q9 TOM1-208ENST00000443206 567 ntTSL 411.24□□□□□ -0.612e-8■■□□□ 14.3
PRPF8Q6P2Q9 EPS8L2-217ENST00000530452 704 ntTSL 316.11■□□□□ 0.179e-15■■□□□ 14.3
PRPF8Q6P2Q9 FGFR4-204ENST00000426612 712 ntTSL 1 (best)17.65■□□□□ 0.426e-15■■□□□ 14.3
PRPF8Q6P2Q9 FGFR4-208ENST00000503708 770 ntTSL 416.25■□□□□ 0.196e-15■■□□□ 14.3
PRPF8Q6P2Q9 FGFR4-205ENST00000430285 713 ntTSL 1 (best)14.8□□□□□ -0.046e-15■■□□□ 14.3
PRPF8Q6P2Q9 KDM5D-208ENST00000485154 792 ntTSL 28.85□□□□□ -0.992e-28■■□□□ 14.3
PRPF8Q6P2Q9 PIEZO1-211ENST00000495568 901 ntTSL 28.46□□□□□ -1.063e-24■■□□□ 14.3
PRPF8Q6P2Q9 ABCC10-206ENST00000443426 774 ntTSL 218.21■□□□□ 0.512e-6■■□□□ 14.3
PRPF8Q6P2Q9 KANSL3-202ENST00000416138 552 ntTSL 416.17■□□□□ 0.182e-19■■□□□ 14.3
PRPF8Q6P2Q9 KANSL3-215ENST00000478492 543 ntTSL 414.13□□□□□ -0.152e-19■■□□□ 14.3
Retrieved 100 of 73,762 protein–RNA pairs in 1523.1 ms