Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
DNMT3AQ9Y6K1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.08■□□□□ 0.8
DNMT3AQ9Y6K1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 KRT17P1-201ENST00000399211 1546 ntBASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 PLK5-205ENST00000642079 1969 ntBASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 AL356652.1-201ENST00000615962 565 ntBASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 AC105020.6-201ENST00000621523 1217 ntBASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 AC007375.3-201ENST00000600936 2314 ntBASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.07■□□□□ 0.8
DNMT3AQ9Y6K1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 AC006128.1-201ENST00000624704 1661 ntBASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.06■□□□□ 0.8
DNMT3AQ9Y6K1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 AC097658.1-201ENST00000475555 843 ntBASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 AC091874.3-201ENST00000512672 1195 ntBASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNMT3AQ9Y6K1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3AQ9Y6K1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 KRT8P36-201ENST00000489121 1440 ntBASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.03■□□□□ 0.8
DNMT3AQ9Y6K1 MYC-209ENST00000641252 345 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms