Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 AC092667.1-201ENST00000434301 2586 ntBASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 AC003102.1-202ENST00000563394 1796 ntBASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGA6Q9Y5G7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA6Q9Y5G7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 AC026471.6-201ENST00000622954 1905 ntBASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA6Q9Y5G7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA6Q9Y5G7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDHGA6Q9Y5G7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA6Q9Y5G7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA6Q9Y5G7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA6Q9Y5G7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA6Q9Y5G7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms