Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 AC133561.4-201ENST00000566112 224 ntBASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 RARRES2P6-201ENST00000567333 442 ntBASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 FP700111.2-201ENST00000619190 1892 ntBASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB1Q9Y5G3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 DUX4L19-201ENST00000557448 1267 ntBASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB1Q9Y5G3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGB1Q9Y5G3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 AC004408.2-201ENST00000623613 2777 ntBASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGB1Q9Y5G3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms