Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 AC093787.1-201ENST00000450396 207 ntBASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 AC116050.2-201ENST00000612102 1779 ntBASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 RPS2P52-201ENST00000469610 820 ntBASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 AC016405.3-201ENST00000607710 860 ntBASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB1Q9Y5F3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 AC091799.1-201ENST00000422823 811 ntBASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 RARRES2P4-201ENST00000514074 484 ntBASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHB1Q9Y5F3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHB1Q9Y5F3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.39■□□□□ 0.86
PCDHB1Q9Y5F3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms