Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 TPRG1LP1-201ENST00000598702 760 ntBASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MRPS28Q9Y2Q9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MRPS28Q9Y2Q9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 AL354811.1-201ENST00000610286 706 ntBASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 AC007952.6-201ENST00000573168 2673 ntBASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 AC003957.1-201ENST00000625108 2673 ntBASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.58■□□□□ 0.4
MRPS28Q9Y2Q9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 AC245052.3-201ENST00000450182 901 ntBASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 AC079140.4-201ENST00000507448 529 ntBASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
MRPS28Q9Y2Q9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPS28Q9Y2Q9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms