Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 AC073912.3-201ENST00000624414 853 ntBASIC26.88■■□□□ 1.89
SPG7Q9UQ90 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 AC233702.5-201ENST00000584107 538 ntBASIC26.87■■□□□ 1.89
SPG7Q9UQ90 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.87■■□□□ 1.89
SPG7Q9UQ90 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 RPS2P55-201ENST00000397318 883 ntBASIC26.86■■□□□ 1.89
SPG7Q9UQ90 AL390719.1-204ENST00000412397 1219 ntBASIC26.86■■□□□ 1.89
SPG7Q9UQ90 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 AC107956.1-201ENST00000494359 873 ntBASIC26.86■■□□□ 1.89
SPG7Q9UQ90 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPG7Q9UQ90 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 AC239809.2-201ENST00000415381 517 ntBASIC26.85■■□□□ 1.89
SPG7Q9UQ90 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.85■■□□□ 1.89
SPG7Q9UQ90 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPG7Q9UQ90 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 AC233723.2-201ENST00000623798 2106 ntBASIC26.83■■□□□ 1.89
SPG7Q9UQ90 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.83■■□□□ 1.89
SPG7Q9UQ90 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.83■■□□□ 1.89
SPG7Q9UQ90 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
SPG7Q9UQ90 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 AC110285.5-201ENST00000611501 352 ntBASIC26.82■■□□□ 1.88
SPG7Q9UQ90 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPG7Q9UQ90 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms