Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM53CQ9NYF3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM53CQ9NYF3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FAM53CQ9NYF3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM53CQ9NYF3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 AC068880.1-201ENST00000507289 2297 ntBASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 AL691432.2-201ENST00000607222 2038 ntBASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM53CQ9NYF3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 DUX4L9-201ENST00000449051 1259 ntBASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 AL034346.1-201ENST00000568244 1277 ntBASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 AC011484.1-201ENST00000377652 1995 ntBASIC20.96■□□□□ 0.95
FAM53CQ9NYF3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
FAM53CQ9NYF3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM53CQ9NYF3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FAM53CQ9NYF3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 AC005703.6-201ENST00000623265 1329 ntBASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM53CQ9NYF3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 603.4 ms