Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 TCF3P1-201ENST00000423021 1937 ntBASIC19.75■□□□□ 0.75
NDE1Q9NXR1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 AC011484.1-201ENST00000377652 1995 ntBASIC19.75■□□□□ 0.75
NDE1Q9NXR1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 AC026471.1-201ENST00000564629 3026 ntBASIC19.75■□□□□ 0.75
NDE1Q9NXR1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDE1Q9NXR1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 AC092720.2-201ENST00000602388 1665 ntBASIC19.74■□□□□ 0.75
NDE1Q9NXR1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.74■□□□□ 0.75
NDE1Q9NXR1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDE1Q9NXR1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NDE1Q9NXR1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms