Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD1Q9NXG2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD1Q9NXG2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 CCDC92B-201ENST00000575506 885 ntBASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 AC116050.2-201ENST00000612102 1779 ntBASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD1Q9NXG2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD1Q9NXG2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 AP001160.3-201ENST00000601484 763 ntBASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 AC112907.3-201ENST00000577781 2400 ntBASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms