Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 CD99P1-205ENST00000527459 561 ntBASIC18.95■□□□□ 0.62
HPF1Q9NWY4 KRT18P6-201ENST00000555540 1265 ntBASIC18.95■□□□□ 0.62
HPF1Q9NWY4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 CYP2T3P-201ENST00000601990 817 ntBASIC18.95■□□□□ 0.62
HPF1Q9NWY4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 AL355472.2-201ENST00000422958 438 ntBASIC18.94■□□□□ 0.62
HPF1Q9NWY4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPF1Q9NWY4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 AC097658.1-201ENST00000475555 843 ntBASIC18.93■□□□□ 0.62
HPF1Q9NWY4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HPF1Q9NWY4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 AL589743.5-201ENST00000616611 1050 ntBASIC18.92■□□□□ 0.62
HPF1Q9NWY4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.92■□□□□ 0.62
HPF1Q9NWY4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.92■□□□□ 0.62
HPF1Q9NWY4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.91■□□□□ 0.62
HPF1Q9NWY4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HPF1Q9NWY4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPF1Q9NWY4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPF1Q9NWY4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPF1Q9NWY4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms