Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CUEDC1Q9NWM3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CUEDC1Q9NWM3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.77■□□□□ 0.76
CUEDC1Q9NWM3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CUEDC1Q9NWM3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CUEDC1Q9NWM3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CUEDC1Q9NWM3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.77■□□□□ 0.75
CUEDC1Q9NWM3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CUEDC1Q9NWM3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 AC027702.1-201ENST00000563810 1770 ntBASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 AC093787.1-201ENST00000450396 207 ntBASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 KRT18P6-201ENST00000555540 1265 ntBASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 AC069236.1-201ENST00000604339 616 ntBASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CUEDC1Q9NWM3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 AC008694.1-202ENST00000636953 945 ntBASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.75■□□□□ 0.75
CUEDC1Q9NWM3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
CUEDC1Q9NWM3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 OR10C1-204ENST00000622521 1039 ntBASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CUEDC1Q9NWM3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CUEDC1Q9NWM3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CUEDC1Q9NWM3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CUEDC1Q9NWM3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms