Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AL356652.1-201ENST00000615962 565 ntBASIC23.76■■□□□ 1.39
RBM28Q9NW13 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBM28Q9NW13 KRT18P68-201ENST00000392293 1000 ntBASIC23.75■■□□□ 1.39
RBM28Q9NW13 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RBM28Q9NW13 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.75■■□□□ 1.39
RBM28Q9NW13 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBM28Q9NW13 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.75■■□□□ 1.39
RBM28Q9NW13 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBM28Q9NW13 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.74■■□□□ 1.39
RBM28Q9NW13 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBM28Q9NW13 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.74■■□□□ 1.39
RBM28Q9NW13 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 AL355472.2-201ENST00000422958 438 ntBASIC23.73■■□□□ 1.39
RBM28Q9NW13 AL121603.2-201ENST00000557373 2117 ntBASIC23.73■■□□□ 1.39
RBM28Q9NW13 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RBM28Q9NW13 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RBM28Q9NW13 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 GUSBP6-202ENST00000438529 1198 ntBASIC23.72■■□□□ 1.39
RBM28Q9NW13 TSPY6P-201ENST00000448518 926 ntBASIC23.72■■□□□ 1.39
RBM28Q9NW13 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 AC105020.6-201ENST00000621523 1217 ntBASIC23.72■■□□□ 1.39
RBM28Q9NW13 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RBM28Q9NW13 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RBM28Q9NW13 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RBM28Q9NW13 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 AL589743.5-201ENST00000616611 1050 ntBASIC23.71■■□□□ 1.39
RBM28Q9NW13 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.71■■□□□ 1.39
RBM28Q9NW13 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms