Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 AC098818.2-201ENST00000564925 2320 ntBASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCF3Q9NUQ8 AC018445.3-201ENST00000624177 1945 ntBASIC20.7■□□□□ 0.91
ABCF3Q9NUQ8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ABCF3Q9NUQ8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
ABCF3Q9NUQ8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 AP006587.3-201ENST00000525742 1516 ntBASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCF3Q9NUQ8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCF3Q9NUQ8 AC020907.5-201ENST00000624372 1936 ntBASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 AC005224.4-201ENST00000583262 1652 ntBASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 AC009237.3-201ENST00000393279 1427 ntBASIC20.68■□□□□ 0.9
ABCF3Q9NUQ8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.67■□□□□ 0.9
ABCF3Q9NUQ8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms