Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 AC079140.4-201ENST00000507448 529 ntBASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 AC087623.3-201ENST00000607047 1098 ntBASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIN7CQ9NUP9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
LIN7CQ9NUP9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.96■□□□□ 0.3
LIN7CQ9NUP9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.96■□□□□ 0.3
LIN7CQ9NUP9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 FP700111.2-201ENST00000619190 1892 ntBASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIN7CQ9NUP9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L2-201ENST00000561772 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L6-201ENST00000626483 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L1-201ENST00000627662 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L8-201ENST00000629013 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L3-201ENST00000630187 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L7-201ENST00000630678 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DUX4L5-201ENST00000630834 1275 ntBASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LIN7CQ9NUP9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.93■□□□□ 0.3
LIN7CQ9NUP9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms