Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.42■□□□□ 0.7
CCM2LQ9NUG4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 TCF3P1-201ENST00000423021 1937 ntBASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2LQ9NUG4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 AC116562.4-201ENST00000641316 2276 ntBASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCM2LQ9NUG4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.39■□□□□ 0.7
CCM2LQ9NUG4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2LQ9NUG4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms