Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 AC100791.3-201ENST00000617619 330 ntBASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 MKRN4P-201ENST00000444706 1521 ntBASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRDM9Q9NQV7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRDM9Q9NQV7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.33■□□□□ 0.69
PRDM9Q9NQV7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRDM9Q9NQV7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 PGM5P4-201ENST00000421970 445 ntBASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 GUSBP6-202ENST00000438529 1198 ntBASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 AC010980.2-201ENST00000587099 1412 ntBASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.33■□□□□ 0.68
PRDM9Q9NQV7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 MIR2861-201ENST00000636310 90 ntBASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PRDM9Q9NQV7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.31■□□□□ 0.68
PRDM9Q9NQV7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PRDM9Q9NQV7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PRDM9Q9NQV7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms