Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 AC008550.1-201ENST00000511500 884 ntBASIC21.19■□□□□ 0.98
HPS4Q9NQG7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HPS4Q9NQG7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 AC242852.2-201ENST00000615738 1807 ntBASIC21.18■□□□□ 0.98
HPS4Q9NQG7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 UBE2SP1-201ENST00000450587 669 ntBASIC21.18■□□□□ 0.98
HPS4Q9NQG7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.18■□□□□ 0.98
HPS4Q9NQG7 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SOX15-203ENST00000570788 1093 ntBASIC21.18■□□□□ 0.98
HPS4Q9NQG7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.18■□□□□ 0.98
HPS4Q9NQG7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS4Q9NQG7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 RPPH1-201ENST00000516869 333 ntBASIC21.17■□□□□ 0.98
HPS4Q9NQG7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS4Q9NQG7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 KRT17P3-201ENST00000420566 1262 ntBASIC21.16■□□□□ 0.98
HPS4Q9NQG7 C1QBPP2-201ENST00000528754 825 ntBASIC21.16■□□□□ 0.98
HPS4Q9NQG7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS4Q9NQG7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms