Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GCM1Q9NP62 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
GCM1Q9NP62 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.46■□□□□ 0.38
GCM1Q9NP62 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
GCM1Q9NP62 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.45■□□□□ 0.38
GCM1Q9NP62 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 NCF1B-203ENST00000435988 1254 ntBASIC17.45■□□□□ 0.38
GCM1Q9NP62 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.45■□□□□ 0.38
GCM1Q9NP62 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 FAM21FP-204ENST00000608637 956 ntBASIC17.45■□□□□ 0.38
GCM1Q9NP62 OR10C1-204ENST00000622521 1039 ntBASIC17.45■□□□□ 0.38
GCM1Q9NP62 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.45■□□□□ 0.38
GCM1Q9NP62 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GCM1Q9NP62 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 RARRES2P4-201ENST00000514074 484 ntBASIC17.44■□□□□ 0.38
GCM1Q9NP62 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GCM1Q9NP62 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.44■□□□□ 0.38
GCM1Q9NP62 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 AC083906.2-201ENST00000511578 360 ntBASIC17.43■□□□□ 0.38
GCM1Q9NP62 AF201337.1-201ENST00000520239 748 ntBASIC17.43■□□□□ 0.38
GCM1Q9NP62 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 AL121832.2-201ENST00000610979 668 ntBASIC17.43■□□□□ 0.38
GCM1Q9NP62 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.43■□□□□ 0.38
GCM1Q9NP62 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GCM1Q9NP62 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GCM1Q9NP62 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 AC011484.1-201ENST00000377652 1995 ntBASIC17.42■□□□□ 0.38
GCM1Q9NP62 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GCM1Q9NP62 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GCM1Q9NP62 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 GPX1P1-201ENST00000388829 606 ntBASIC17.42■□□□□ 0.38
GCM1Q9NP62 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.42■□□□□ 0.38
GCM1Q9NP62 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.42■□□□□ 0.38
GCM1Q9NP62 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 AC105036.2-201ENST00000569468 176 ntBASIC17.42■□□□□ 0.38
GCM1Q9NP62 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GCM1Q9NP62 AC005229.4-201ENST00000610085 2198 ntBASIC17.42■□□□□ 0.38
GCM1Q9NP62 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms