Protein–RNA interactions for Protein: Q9HC29

NOD2, Nucleotide-binding oligomerization domain-containing protein 2, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD2Q9HC29 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NOD2Q9HC29 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOD2Q9HC29 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.15■□□□□ 0.98
NOD2Q9HC29 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
NOD2Q9HC29 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.14■□□□□ 0.98
NOD2Q9HC29 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
NOD2Q9HC29 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 AC004911.1-201ENST00000416316 871 ntBASIC21.14■□□□□ 0.97
NOD2Q9HC29 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 MFSD11-216ENST00000590393 1141 ntBASIC21.14■□□□□ 0.97
NOD2Q9HC29 AL137784.2-201ENST00000607332 1000 ntBASIC21.14■□□□□ 0.97
NOD2Q9HC29 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOD2Q9HC29 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOD2Q9HC29 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOD2Q9HC29 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOD2Q9HC29 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NOD2Q9HC29 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.13■□□□□ 0.97
NOD2Q9HC29 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.13■□□□□ 0.97
NOD2Q9HC29 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NOD2Q9HC29 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.13■□□□□ 0.97
NOD2Q9HC29 AC011767.1-201ENST00000617410 1153 ntBASIC21.13■□□□□ 0.97
NOD2Q9HC29 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.13■□□□□ 0.97
NOD2Q9HC29 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NOD2Q9HC29 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 BID-214ENST00000617586 542 ntTSL 5 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOD2Q9HC29 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
NOD2Q9HC29 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 AC087289.5-201ENST00000586076 3175 ntBASIC21.11■□□□□ 0.97
NOD2Q9HC29 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOD2Q9HC29 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NOD2Q9HC29 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.1■□□□□ 0.97
NOD2Q9HC29 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NOD2Q9HC29 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOD2Q9HC29 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.1■□□□□ 0.97
NOD2Q9HC29 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms