Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 TERF1P5-201ENST00000477545 1207 ntBASIC19.58■□□□□ 0.72
BRF2Q9HAW0 FAM21FP-204ENST00000608637 956 ntBASIC19.58■□□□□ 0.72
BRF2Q9HAW0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 AC010536.3-201ENST00000620306 533 ntBASIC19.58■□□□□ 0.72
BRF2Q9HAW0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF2Q9HAW0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF2Q9HAW0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 KRT18P5-201ENST00000436075 1291 ntBASIC19.56■□□□□ 0.72
BRF2Q9HAW0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL162412.1-201ENST00000567129 965 ntBASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL591742.1-201ENST00000604433 565 ntBASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL512408.1-201ENST00000569378 2000 ntBASIC19.56■□□□□ 0.72
BRF2Q9HAW0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.56■□□□□ 0.72
BRF2Q9HAW0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AC026271.2-201ENST00000428091 497 ntBASIC19.55■□□□□ 0.72
BRF2Q9HAW0 KRT8P36-201ENST00000489121 1440 ntBASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AC007322.4-201ENST00000509611 723 ntBASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.55■□□□□ 0.72
BRF2Q9HAW0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms