Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 FAM21FP-204ENST00000608637 956 ntBASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCNX3Q9H6A9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 HLA-L-209ENST00000420110 1011 ntBASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 AL138781.1-201ENST00000566567 1274 ntBASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 AC083880.1-201ENST00000608266 535 ntBASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 AL121832.2-201ENST00000610979 668 ntBASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 AC100791.3-201ENST00000617619 330 ntBASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.59■□□□□ 0.57
PCNX3Q9H6A9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX3Q9H6A9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX3Q9H6A9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 AC027702.1-201ENST00000563810 1770 ntBASIC18.57■□□□□ 0.56
PCNX3Q9H6A9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 LINC01006-201ENST00000333319 2292 ntBASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX3Q9H6A9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCNX3Q9H6A9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX3Q9H6A9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
PCNX3Q9H6A9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms