Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 AL121832.2-201ENST00000610979 668 ntBASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 AC010536.3-201ENST00000620306 533 ntBASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 AC005181.1-201ENST00000604782 1256 ntBASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4CQ9H3R0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4CQ9H3R0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 AC008175.2-201ENST00000612840 297 ntBASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 AL020996.1-203ENST00000536896 2307 ntBASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM4CQ9H3R0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 AC083906.2-201ENST00000511578 360 ntBASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 AL050303.2-201ENST00000619798 666 ntBASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 AC120498.10-201ENST00000621827 505 ntBASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.22■□□□□ 0.99
KDM4CQ9H3R0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.21■□□□□ 0.99
KDM4CQ9H3R0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KDM4CQ9H3R0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4CQ9H3R0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4CQ9H3R0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms