Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-1Q9BYQ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 Six3os1_6.1-201ENST00000620790 196 ntBASIC10.71□□□□□ -0.69
KRTAP4-1Q9BYQ7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC124283.5-201ENST00000624661 1809 ntBASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 HES2-206ENST00000489730 730 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 TK2-213ENST00000563369 882 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 MIR4785-201ENST00000585005 73 ntBASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL445228.2-201ENST00000605589 952 ntBASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP4-1Q9BYQ7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms