Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA1CQ9BQE3 AC006128.1-201ENST00000624704 1661 ntBASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 AC137761.2-201ENST00000561729 223 ntBASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 AC145350.3-201ENST00000569033 163 ntBASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1CQ9BQE3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 AC055733.4-201ENST00000638462 1354 ntBASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 KRT19P1-201ENST00000405746 1186 ntBASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 RARRES2P11-201ENST00000635158 484 ntBASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 AC026471.6-201ENST00000622954 1905 ntBASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1CQ9BQE3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 AC016769.1-201ENST00000409132 1010 ntBASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 AL034346.1-201ENST00000568244 1277 ntBASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TUBA1CQ9BQE3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms