Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 AC093787.1-201ENST00000450396 207 ntBASIC20.76■□□□□ 0.91
SEMA3CQ99985 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.76■□□□□ 0.91
SEMA3CQ99985 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 AC133552.2-202ENST00000575694 574 ntBASIC20.76■□□□□ 0.91
SEMA3CQ99985 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3CQ99985 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
SEMA3CQ99985 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 CYP21A1P-202ENST00000354927 1481 ntBASIC20.75■□□□□ 0.91
SEMA3CQ99985 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 MIR2861-201ENST00000636310 90 ntBASIC20.75■□□□□ 0.91
SEMA3CQ99985 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3CQ99985 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.75■□□□□ 0.91
SEMA3CQ99985 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.74■□□□□ 0.91
SEMA3CQ99985 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SEMA3CQ99985 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SEMA3CQ99985 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA3CQ99985 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SEMA3CQ99985 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 AF201337.1-201ENST00000520239 748 ntBASIC20.73■□□□□ 0.91
SEMA3CQ99985 AL121603.2-201ENST00000557373 2117 ntBASIC20.73■□□□□ 0.91
SEMA3CQ99985 AC105036.2-201ENST00000569468 176 ntBASIC20.73■□□□□ 0.91
SEMA3CQ99985 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 AC100791.3-201ENST00000617619 330 ntBASIC20.73■□□□□ 0.91
SEMA3CQ99985 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA3CQ99985 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SEMA3CQ99985 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 AC010980.2-201ENST00000587099 1412 ntBASIC20.72■□□□□ 0.91
SEMA3CQ99985 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 ABHD17AP1-201ENST00000358206 933 ntBASIC20.72■□□□□ 0.91
SEMA3CQ99985 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 AL512625.2-201ENST00000417533 625 ntBASIC20.72■□□□□ 0.91
SEMA3CQ99985 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.72■□□□□ 0.91
SEMA3CQ99985 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA3CQ99985 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA3CQ99985 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms