Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 TERF1P5-201ENST00000477545 1207 ntBASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 AC010536.3-201ENST00000620306 533 ntBASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB18PQ96TA0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB18PQ96TA0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 AC112907.3-201ENST00000577781 2400 ntBASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 AC137761.2-201ENST00000561729 223 ntBASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 AC145350.3-201ENST00000569033 163 ntBASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 PCDHAC2-203ENST00000615316 3011 ntBASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB18PQ96TA0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.7■■□□□ 1.07
PCDHB18PQ96TA0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB18PQ96TA0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 MFSD11-216ENST00000590393 1141 ntBASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 AC099778.1-201ENST00000568593 1911 ntBASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB18PQ96TA0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms