Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG4P5Q96PW8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG4P5Q96PW8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 AC004911.1-201ENST00000416316 871 ntBASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 AC231657.2-201ENST00000624556 255 ntBASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CSPG4P5Q96PW8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 AC007322.1-201ENST00000426983 750 ntBASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 RARRES2P4-201ENST00000514074 484 ntBASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG4P5Q96PW8 CYP21A1P-202ENST00000354927 1481 ntBASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 CYP2T1P-201ENST00000432607 1285 ntBASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 KRT8P36-201ENST00000489121 1440 ntBASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CSPG4P5Q96PW8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CSPG4P5Q96PW8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.08■□□□□ 0.96
CSPG4P5Q96PW8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms