Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 AL355472.2-201ENST00000422958 438 ntBASIC17.03■□□□□ 0.32
GAFA1Q96PS6 NCF1B-203ENST00000435988 1254 ntBASIC17.03■□□□□ 0.32
GAFA1Q96PS6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 AL121603.2-201ENST00000557373 2117 ntBASIC17.03■□□□□ 0.32
GAFA1Q96PS6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.03■□□□□ 0.32
GAFA1Q96PS6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 PGM5P4-201ENST00000421970 445 ntBASIC17.02■□□□□ 0.32
GAFA1Q96PS6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.02■□□□□ 0.32
GAFA1Q96PS6 AC083906.2-201ENST00000511578 360 ntBASIC17.02■□□□□ 0.32
GAFA1Q96PS6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAFA1Q96PS6 CYP2T3P-201ENST00000601990 817 ntBASIC17.02■□□□□ 0.32
GAFA1Q96PS6 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.02■□□□□ 0.32
GAFA1Q96PS6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
GAFA1Q96PS6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAFA1Q96PS6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GAFA1Q96PS6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAFA1Q96PS6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.02■□□□□ 0.31
GAFA1Q96PS6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 MKRN4P-201ENST00000444706 1521 ntBASIC17.01■□□□□ 0.31
GAFA1Q96PS6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 AL356652.1-201ENST00000615962 565 ntBASIC17.01■□□□□ 0.31
GAFA1Q96PS6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 KRT8P36-201ENST00000489121 1440 ntBASIC17.01■□□□□ 0.31
GAFA1Q96PS6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GAFA1Q96PS6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17■□□□□ 0.31
GAFA1Q96PS6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
GAFA1Q96PS6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GAFA1Q96PS6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GAFA1Q96PS6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
GAFA1Q96PS6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms