Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC246785.2-201ENST00000432512 513 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 LINC01238-205ENST00000567549 1107 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 AC093458.2-201ENST00000623150 629 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 DUSP8P3-201ENST00000399571 1760 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 AC027702.1-201ENST00000563810 1770 ntBASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 KRT18P68-201ENST00000392293 1000 ntBASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 AL390955.1-201ENST00000428694 934 ntBASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 KRT18P16-201ENST00000510337 1294 ntBASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 AC120498.8-201ENST00000614275 531 ntBASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CNTNAP3BQ96NU0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP3BQ96NU0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CNTNAP3BQ96NU0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP3BQ96NU0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.58■□□□□ 0.73
CNTNAP3BQ96NU0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CNTNAP3BQ96NU0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 AK4P3-201ENST00000418260 669 ntBASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP3BQ96NU0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 BX664615.1-201ENST00000443558 458 ntBASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNTNAP3BQ96NU0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 HTR7P1-201ENST00000538670 1336 ntBASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 AL031133.1-201ENST00000406807 723 ntBASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms