Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDHR1Q96JP9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDHR1Q96JP9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDHR1Q96JP9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CDHR1Q96JP9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 FEM1AP4-201ENST00000443167 1987 ntBASIC23.01■■□□□ 1.27
CDHR1Q96JP9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.01■■□□□ 1.27
CDHR1Q96JP9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 AC079834.2-201ENST00000609776 1949 ntBASIC23■■□□□ 1.27
CDHR1Q96JP9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23■■□□□ 1.27
CDHR1Q96JP9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23■■□□□ 1.27
CDHR1Q96JP9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23■■□□□ 1.27
CDHR1Q96JP9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23■■□□□ 1.27
CDHR1Q96JP9 AC006058.3-201ENST00000606217 1069 ntBASIC23■■□□□ 1.27
CDHR1Q96JP9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDHR1Q96JP9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDHR1Q96JP9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.99■■□□□ 1.27
CDHR1Q96JP9 UNC93B4-201ENST00000505679 747 ntBASIC22.99■■□□□ 1.27
CDHR1Q96JP9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 MIR2861-201ENST00000636310 90 ntBASIC22.99■■□□□ 1.27
CDHR1Q96JP9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDHR1Q96JP9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDHR1Q96JP9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 PRORSD1P-201ENST00000295112 541 ntBASIC22.97■■□□□ 1.27
CDHR1Q96JP9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDHR1Q96JP9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.96■■□□□ 1.27
CDHR1Q96JP9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CDHR1Q96JP9 AC128676.1-201ENST00000454392 318 ntBASIC22.96■■□□□ 1.27
CDHR1Q96JP9 AC008403.3-201ENST00000598924 454 ntBASIC22.96■■□□□ 1.27
CDHR1Q96JP9 KRT8P36-201ENST00000489121 1440 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms