Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 AL356652.1-201ENST00000615962 565 ntBASIC20.81■□□□□ 0.92
SHDQ96IW2 AC092865.7-201ENST00000641832 219 ntBASIC20.81■□□□□ 0.92
SHDQ96IW2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHDQ96IW2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHDQ96IW2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.81■□□□□ 0.92
SHDQ96IW2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
SHDQ96IW2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SHDQ96IW2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SHDQ96IW2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SHDQ96IW2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SHDQ96IW2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.8■□□□□ 0.92
SHDQ96IW2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.8■□□□□ 0.92
SHDQ96IW2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SHDQ96IW2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.8■□□□□ 0.92
SHDQ96IW2 AF186192.3-201ENST00000583427 947 ntBASIC20.8■□□□□ 0.92
SHDQ96IW2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.8■□□□□ 0.92
SHDQ96IW2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHDQ96IW2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHDQ96IW2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SHDQ96IW2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.8■□□□□ 0.92
SHDQ96IW2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SHDQ96IW2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHDQ96IW2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
SHDQ96IW2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 KRT16P5-201ENST00000455284 522 ntBASIC20.79■□□□□ 0.92
SHDQ96IW2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.79■□□□□ 0.92
SHDQ96IW2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.79■□□□□ 0.92
SHDQ96IW2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHDQ96IW2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SHDQ96IW2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.78■□□□□ 0.92
SHDQ96IW2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 AC005363.2-201ENST00000618631 242 ntBASIC20.78■□□□□ 0.92
SHDQ96IW2 AL121829.2-201ENST00000620908 328 ntBASIC20.78■□□□□ 0.92
SHDQ96IW2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.78■□□□□ 0.92
SHDQ96IW2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHDQ96IW2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHDQ96IW2 HTR7P1-201ENST00000538670 1336 ntBASIC20.78■□□□□ 0.92
SHDQ96IW2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.77■□□□□ 0.92
SHDQ96IW2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.77■□□□□ 0.92
SHDQ96IW2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.77■□□□□ 0.92
SHDQ96IW2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
SHDQ96IW2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.77■□□□□ 0.92
SHDQ96IW2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.77■□□□□ 0.92
SHDQ96IW2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.77■□□□□ 0.92
SHDQ96IW2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHDQ96IW2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SHDQ96IW2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SHDQ96IW2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHDQ96IW2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHDQ96IW2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SHDQ96IW2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHDQ96IW2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SHDQ96IW2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHDQ96IW2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHDQ96IW2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.76■□□□□ 0.91
SHDQ96IW2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHDQ96IW2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.76■□□□□ 0.91
SHDQ96IW2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHDQ96IW2 AC145285.6-201ENST00000604632 637 ntBASIC20.76■□□□□ 0.91
SHDQ96IW2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms