Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
IFT43Q96FT9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
IFT43Q96FT9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IFT43Q96FT9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 AL355802.2-201ENST00000402069 882 ntBASIC21.01■□□□□ 0.95
IFT43Q96FT9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 AC142086.2-201ENST00000569753 217 ntBASIC21.01■□□□□ 0.95
IFT43Q96FT9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 AC005181.1-201ENST00000604782 1256 ntBASIC21.01■□□□□ 0.95
IFT43Q96FT9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT43Q96FT9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT43Q96FT9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.01■□□□□ 0.95
IFT43Q96FT9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT43Q96FT9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21■□□□□ 0.95
IFT43Q96FT9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21■□□□□ 0.95
IFT43Q96FT9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21■□□□□ 0.95
IFT43Q96FT9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
IFT43Q96FT9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21■□□□□ 0.95
IFT43Q96FT9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21■□□□□ 0.95
IFT43Q96FT9 AL050303.2-201ENST00000619798 666 ntBASIC21■□□□□ 0.95
IFT43Q96FT9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21■□□□□ 0.95
IFT43Q96FT9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21■□□□□ 0.95
IFT43Q96FT9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21■□□□□ 0.95
IFT43Q96FT9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
IFT43Q96FT9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 AC083906.2-201ENST00000511578 360 ntBASIC20.99■□□□□ 0.95
IFT43Q96FT9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
IFT43Q96FT9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT43Q96FT9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 AC010536.3-201ENST00000620306 533 ntBASIC20.98■□□□□ 0.95
IFT43Q96FT9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
IFT43Q96FT9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT43Q96FT9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 TSPY6P-201ENST00000448518 926 ntBASIC20.97■□□□□ 0.95
IFT43Q96FT9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IFT43Q96FT9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
IFT43Q96FT9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IFT43Q96FT9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IFT43Q96FT9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IFT43Q96FT9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IFT43Q96FT9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IFT43Q96FT9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms