Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZNF428Q96B54 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.36■■□□□ 1.81
ZNF428Q96B54 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 AL512625.2-201ENST00000417533 625 ntBASIC26.35■■□□□ 1.81
ZNF428Q96B54 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 AC083880.1-201ENST00000608266 535 ntBASIC26.35■■□□□ 1.81
ZNF428Q96B54 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.35■■□□□ 1.81
ZNF428Q96B54 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF428Q96B54 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.34■■□□□ 1.81
ZNF428Q96B54 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.34■■□□□ 1.81
ZNF428Q96B54 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
ZNF428Q96B54 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ZNF428Q96B54 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 MIR4758-201ENST00000577688 71 ntBASIC26.34■■□□□ 1.81
ZNF428Q96B54 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF428Q96B54 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZNF428Q96B54 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
ZNF428Q96B54 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
ZNF428Q96B54 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZNF428Q96B54 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.33■■□□□ 1.81
ZNF428Q96B54 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.33■■□□□ 1.81
ZNF428Q96B54 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ZNF428Q96B54 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
ZNF428Q96B54 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
ZNF428Q96B54 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF428Q96B54 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF428Q96B54 AC087633.2-202ENST00000565166 1439 ntBASIC26.32■■□□□ 1.8
ZNF428Q96B54 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.32■■□□□ 1.8
ZNF428Q96B54 CYP21A1P-202ENST00000354927 1481 ntBASIC26.32■■□□□ 1.8
ZNF428Q96B54 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ZNF428Q96B54 PGM5P4-201ENST00000421970 445 ntBASIC26.32■■□□□ 1.8
ZNF428Q96B54 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.32■■□□□ 1.8
ZNF428Q96B54 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF428Q96B54 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 KRT17P1-201ENST00000399211 1546 ntBASIC26.31■■□□□ 1.8
ZNF428Q96B54 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF428Q96B54 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.31■■□□□ 1.8
ZNF428Q96B54 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF428Q96B54 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF428Q96B54 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF428Q96B54 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF428Q96B54 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ZNF428Q96B54 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 MCRIP2P1-201ENST00000394346 511 ntBASIC26.29■■□□□ 1.8
ZNF428Q96B54 DUSP5P2-201ENST00000426873 1033 ntBASIC26.29■■□□□ 1.8
ZNF428Q96B54 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 KRT8P36-201ENST00000489121 1440 ntBASIC26.29■■□□□ 1.8
ZNF428Q96B54 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF428Q96B54 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.29■■□□□ 1.8
ZNF428Q96B54 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.28■■□□□ 1.8
ZNF428Q96B54 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF428Q96B54 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ZNF428Q96B54 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF428Q96B54 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms